RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 CEP250Q9BV73 2442 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 NRP1O14786 923 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 N4BP1O75113 896 aaKnown RBP9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 SOD2P04179 222 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 RPS6KB1P23443 525 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 HSPA4P34932 840 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 NLRP5P59047 1200 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 PSMC5P62195 406 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 IRX6P78412 446 aaPredicted RBP9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 ANGPT1Q15389 498 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 NPY5RQ15761 445 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 UBXN11Q5T124 520 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 KIAA0319Q5VV43 1072 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 SRGAP1Q7Z6B7 1085 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 EXOC8Q8IYI6 725 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 RNF168Q8IYW5 571 aaPredicted RBP9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 ADSSL1Q8N142 457 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 URGCPQ8TCY9 931 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 HDAC7Q8WUI4 952 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 NXPE3Q969Y0 559 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 RPS6KC1Q96S38 1066 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 SLC26A6Q9BXS9 759 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 GBP3Q9H0R5 595 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 SEMA4AQ9H3S1 761 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 DHX33Q9H6R0 707 aaKnown RBP9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 MINDY3Q9H8M7 445 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 RSAD1Q9HA92 442 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 RXFP1Q9HBX9 757 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 WDR6Q9NNW5 1121 aaKnown RBP9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 UBN1Q9NPG3 1134 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 MRPL17Q9NRX2 175 aaKnown RBP9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 EPS15L1Q9UBC2 864 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 PCDHA4Q9UN74 947 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 SSX2IPQ9Y2D8 614 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 PPME1Q9Y570 386 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 COL4A3BPQ9Y5P4 624 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 SNX14Q9Y5W7 946 aa9.61□□□□□ -0.87
COL4A3BP-202ENST00000357457 TDRD15B5MCY1 1934 aaKnown RBP9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 CCDC195A0A1B0GUA6 201 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 EML1O00423 815 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 ASAP2O43150 1006 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 TDP2O95551 362 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 NCLP19338 710 aaKnown RBP9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 QARSP47897 775 aaKnown RBP9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 ID4P47928 161 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 NPEPPSP55786 919 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 DSC1Q08554 894 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 PPP2R5CQ13362 524 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 TAS1R1Q7RTX1 841 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 COLGALT2Q8IYK4 626 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 GPR65Q8IYL9 337 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 SIX5Q8N196 739 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 SLC44A3Q8N4M1 653 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 DAGLBQ8NCG7 672 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 SMG8Q8ND04 991 aaKnown RBP9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 CNNM3Q8NE01 707 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 PRPF31Q8WWY3 499 aaKnown RBP9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 NLRP4Q96MN2 994 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 JAKMIP1Q96N16 626 aaKnown RBP9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 KCNMB3Q9NPA1 279 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 MAN1C1Q9NR34 630 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 CHST7Q9NS84 486 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 MARCH5Q9NX47 278 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 DPP7Q9UHL4 492 aa9.6□□□□□ -0.87
COL4A3BP-202ENST00000357457 KRBA1A5PL33 1030 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 TEX28O15482 410 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 NARSO43776 548 aaKnown RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 DKC1O60832 514 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 CDC45O75419 566 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 P4HBP07237 508 aaKnown RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 ADH1AP07327 375 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 CCT2P78371 535 aaKnown RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 DSG1Q02413 1049 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 POU5F1BQ06416 359 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 LAMTOR4Q0VGL1 99 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 NONOQ15233 471 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 PCBP1Q15365 356 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 PLA2G4FQ68DD2 849 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 LILRA6Q6PI73 481 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 C4orf19Q8IY42 314 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 BLIDQ8IZY5 108 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 PSPC1Q8WXF1 523 aaKnown RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 SLC7A3Q8WY07 619 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 STAMQ92783 540 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 ZNF707Q96C28 371 aaPredicted RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 FAM20AQ96MK3 541 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 FAM193BQ96PV7 902 aaPredicted RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 HERC2P3Q9BVR0 1158 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 PLEKHA4Q9H4M7 779 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 NCOA5Q9HCD5 579 aaKnown RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 MIOSQ9NXC5 875 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 WRAP73Q9P2S5 460 aaPredicted RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 DDX25Q9UHL0 483 aaKnown RBP9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 FBXL21Q9UKT6 434 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 VAV3Q9UKW4 847 aa9.59□□□□□ -0.87
COL4A3BP-202ENST00000357457 GPR179Q6PRD1 2367 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms