RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 UBXN2AP68543 259 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 TSPY1Q01534 308 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 KCNA1Q09470 495 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 PDIA2Q13087 525 aaKnown RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 HABP4Q5JVS0 413 aaKnown RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 FBXW10Q5XX13 1052 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 TRPM8Q7Z2W7 1104 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 GRAMD1CQ8IYS0 662 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 TTLL6Q8N841 843 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 MOSPD1Q9UJG1 213 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 HPCAL4Q9UM19 191 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 GDF11O95390 407 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 MYL3P08590 195 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 OCM2P0CE71 109 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 OCMP0CE72 109 aaPredicted RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 ZNF18P17022 549 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 KHDRBS2Q5VWX1 349 aaKnown RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 TRIM72Q6ZMU5 477 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 TNIP2Q8NFZ5 429 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 GINS4Q9BRT9 223 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 MRPL1Q9BYD6 325 aaKnown RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 POLIQ9UNA4 740 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 AURKCQ9UQB9 309 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 K7ERI5 159 aa13.58□□□□□ -0.23
SMC4-202ENST00000357388 BNIP3LO60238 219 aa13.58□□□□□ -0.23
SMC4-202ENST00000357388 NBNO60934 754 aa13.58□□□□□ -0.23
SMC4-202ENST00000357388 FAM107AO95990 144 aa13.58□□□□□ -0.23
SMC4-202ENST00000357388 ASNSP08243 561 aa13.58□□□□□ -0.23
SMC4-202ENST00000357388 LRRC31Q6UY01 552 aa13.58□□□□□ -0.23
SMC4-202ENST00000357388 SEC16BQ96JE7 1060 aa13.58□□□□□ -0.23
SMC4-202ENST00000357388 NSMCE4AQ9NXX6 385 aa13.58□□□□□ -0.23
SMC4-202ENST00000357388 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 MYO3BQ8WXR4 1341 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 NSUN2Q08J23 767 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMC4-202ENST00000357388 TMED8Q6PL24 325 aaPredicted RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 XPO6Q96QU8 1125 aaKnown RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 ROPN1BQ9BZX4 212 aaPredicted RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 TRABDQ9H4I3 376 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 ROPN1Q9HAT0 212 aaPredicted RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 SRP72O76094 671 aaKnown RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 SERPINB9P50453 376 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 LRRC24Q50LG9 513 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 RIBC1Q8N443 379 aaPredicted RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 TTC39CQ8N584 583 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 PCYOX1LQ8NBM8 494 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 SH3GL1Q99961 368 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 FSD1LQ9BXM9 530 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 TMEM191CA6NGB0 347 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 SEC24DO94855 1032 aaPredicted RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 CLK1P49759 484 aaKnown RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 STX3Q13277 289 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 TEKT4Q8WW24 435 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 PPP2R3CQ969Q6 453 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 MSTO1Q9BUK6 570 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 TSSK1BQ9BXA7 367 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 FAM129AQ9BZQ8 928 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 COA1Q9GZY4 146 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 PARVBQ9HBI1 364 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 BFARQ9NZS9 450 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 FBXO2Q9UK22 296 aaPredicted RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 PCDHGB4Q9UN71 923 aa13.58□□□□□ -0.24
SMC4-202ENST00000357388 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
SMC4-202ENST00000357388 LRRC53A6NM62 1247 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 LIFRP42702 1097 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 FBXW4P57775 412 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 NR5A1Q13285 461 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 KIAA1755Q5JYT7 1200 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 CCDC137Q6PK04 289 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 RHOT1Q8IXI2 618 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 GSPT2Q8IYD1 628 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMC4-202ENST00000357388 ZNF564Q8TBZ8 553 aaPredicted RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 EDC3Q96F86 508 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 PCIF1Q9H4Z3 704 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ZNF556Q9HAH1 456 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 TMEM2Q9UHN6 1383 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 WDR62O43379 1518 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 NEMP1O14524 444 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ZSCAN9O15535 394 aaPredicted RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 MAP3K13O43283 966 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 TOMM70O94826 608 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ENO1P06733 434 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 ZNF667Q5HYK9 610 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ZBED8Q8IZ13 594 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 SLC40A1Q9NP59 571 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 HOXC10Q9NYD6 342 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 SMAPO00193 183 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 AKAP10O43572 662 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 RAD17O75943 681 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 CSPG5O95196 566 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ROR1Q01973 937 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 LBRQ14739 615 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 IZUMO3Q5VZ72 239 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms