RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PRDX5P30044 214 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 ARSEP51690 589 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 KRT27Q7Z3Y8 459 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 ADSSL1Q8N142 457 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 OLA1Q9NTK5 396 aaKnown RBP15.74■□□□□ 0.11
CHD4-201ENST00000357008 UTYO14607 1347 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 TMEM247A6NEH6 219 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 IFNA8P32881 189 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.113e-7■■■■□ 24.1
CHD4-201ENST00000357008 ANGPTL8Q6UXH0 198 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 PIGBQ92521 554 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 CCDC90BQ9GZT6 254 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 TUBE1Q9UJT0 475 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 KDM6BO15054 1643 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 USP17L10C9JJH3 530 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 TRIM66O15016 1216 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 NPR1P16066 1061 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 SLC27A3Q5K4L6 730 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 TRIM9Q9C026 710 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 PARVAQ9NVD7 372 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 ASNSP08243 561 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
CHD4-201ENST00000357008 DPY19L2Q6NUT2 758 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 XPO6Q96QU8 1125 aaKnown RBP15.74■□□□□ 0.11
CHD4-201ENST00000357008 SFNP31947 248 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 RCSD1Q6JBY9 416 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 CNPY4Q8N129 248 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 CEP95Q96GE4 821 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 ROBO2Q9HCK4 1378 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 GPC3P51654 580 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 USP11P51784 963 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 POU5F1BQ06416 359 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 PDIA5Q14554 519 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 Q3C1V9 767 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 TC2NQ8N9U0 490 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 PRPF38AQ8NAV1 312 aaKnown RBP15.73■□□□□ 0.11
CHD4-201ENST00000357008 MS4A14Q96JA4 679 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 EHD2Q9NZN4 543 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 CDHR2Q9BYE9 1310 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 DNAJC6O75061 913 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 TRIM49P0CI25 452 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 TRIM49CP0CI26 452 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 LSP1P33241 339 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 FXR1P51114 621 aaKnown RBP eCLIP15.73■□□□□ 0.117e-7■■■■□ 19.6
CHD4-201ENST00000357008 CUL3Q13618 768 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 SGSM3Q96HU1 749 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 RMDN3Q96TC7 470 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 ADGRL3Q9HAR2 1447 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 PIK3R2O00459 728 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 PHF2O75151 1096 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 MARK3P27448 753 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 KLC1Q07866 573 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 CAPRIN1Q14444 709 aaKnown RBP15.73■□□□□ 0.11
CHD4-201ENST00000357008 TTC39CQ8N584 583 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 SEC16BQ96JE7 1060 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 PPP1R16BQ96T49 567 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 STAP1Q9ULZ2 295 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 ZFYVE16Q7Z3T8 1539 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 PSMD14O00487 310 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 ORC4O43929 436 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 ANP32DO95626 131 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 ITIH2P19823 946 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 NSUN2Q08J23 767 aaKnown RBP eCLIP15.73■□□□□ 0.11
CHD4-201ENST00000357008 ZC4H2Q9NQZ6 224 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 ARHGAP26Q9UNA1 814 aa15.73■□□□□ 0.11
CHD4-201ENST00000357008 TDP2O95551 362 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 ELF1P32519 619 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 RANBP1P43487 201 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 DPYDQ12882 1025 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 ITPRIPL1Q6GPH6 555 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 STOX1Q6ZVD7 989 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 MIGA2Q7L4E1 593 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 POLD4Q9HCU8 107 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 TOPORSQ9NS56 1045 aaPredicted RBP15.72■□□□□ 0.11
CHD4-201ENST00000357008 M0QYV0 167 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 SLC16A3O15427 465 aaKnown RBP15.72■□□□□ 0.11
CHD4-201ENST00000357008 CCND1P24385 295 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 DNAL1Q4LDG9 190 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 CATSPER4Q7RTX7 472 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 ZFXP17010 805 aaPredicted RBP15.72■□□□□ 0.11
CHD4-201ENST00000357008 KRT4P19013 534 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 IL10P22301 178 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 HLFQ16534 295 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 RFX8Q6ZV50 586 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 GIMAP8Q8ND71 665 aaPredicted RBP15.72■□□□□ 0.11
CHD4-201ENST00000357008 DTNBP1Q96EV8 351 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 ZNF341Q9BYN7 854 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 PHF20L1A8MW92 1017 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 IRAK1P51617 712 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 ZNF568Q3ZCX4 644 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 NDUFAF2Q8N183 169 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 ALKBH8Q96BT7 664 aaKnown RBP15.72■□□□□ 0.11
CHD4-201ENST00000357008 RANBP17Q9H2T7 1088 aaKnown RBP15.72■□□□□ 0.11
CHD4-201ENST00000357008 AP1B1Q10567 949 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 MED21Q13503 144 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 FLOT2Q14254 428 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 RAD9BQ6WBX8 426 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 RHPN2Q8IUC4 686 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 MTBPQ96DY7 904 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms