RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 PCCAP05165 728 aaPredicted RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 HOXD12P35452 270 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 RRP1BQ14684 758 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 CFAP157Q5JU67 520 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 MAP7D3Q8IWC1 876 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 SLC15A3Q8IY34 581 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 IFNL3Q8IZI9 196 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 ATP11CQ8NB49 1132 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 SPATA5Q8NB90 893 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 KIAA0895Q8NCT3 520 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 FNDC8Q8TC99 324 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 DQX1Q8TE96 717 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 TEKT1Q969V4 418 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 PTCD3Q96EY7 689 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 MPP4Q96JB8 637 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 MIPEPQ99797 713 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 PACSIN1Q9BY11 444 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 ANKRD2Q9GZV1 360 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 GANQ9H2C0 597 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 ARMCX3Q9UH62 379 aaPredicted RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 NAGPAQ9UK23 515 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 DBR1Q9UK59 544 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 RGPD8O14715 1765 aaPredicted RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 MYH3P11055 1940 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 PFASO15067 1338 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 E9PBE3 544 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 PRPF4O43172 522 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCR9-201ENST00000355983 CBFA2T3O75081 653 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 KRT36O76013 467 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 GAS8O95995 478 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 FGGP02679 453 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 SPATA31D3P0C874 917 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 BRAFP15056 766 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 CTNNA2P26232 953 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 SERPINB3P29508 390 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 CCNFP41002 786 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 DNA2P51530 1060 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 HADHBP55084 474 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 PPARDQ03181 441 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 ORC2Q13416 577 aaPredicted RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 PRPF4BQ13523 1007 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 DUS1LQ6P1R4 473 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 SPATA31D4Q6ZUB0 917 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 IRF2BP2Q7Z5L9 587 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 ZC3H3Q8IXZ2 948 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 KBTBD2Q8IY47 623 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 BBS5Q8N3I7 341 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 USHBP1Q8N6Y0 703 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 PDCD7Q8N8D1 485 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 GAB3Q8WWW8 586 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 SLCO2A1Q92959 643 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 NLRP3Q96P20 1036 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 ABCF2Q9UG63 623 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 ADAMTS1Q9UHI8 967 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 SYNGAP1Q96PV0 1343 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 PRAMEF22A3QJZ6 481 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 NDC80O14777 642 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 H2AFZP0C0S5 128 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 FOXN2P32314 431 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 NLRP6P59044 892 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 RAPGEF1Q13905 1077 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 LRRC14Q15048 493 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 TCEAL1Q15170 157 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 P3H1Q32P28 736 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 LRRC24Q50LG9 513 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 SYCP2LQ5T4T6 812 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 MAP3K21Q5TCX8 1036 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 AAGABQ6PD74 315 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 Q6ZNX1 250 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 H2AFVQ71UI9 128 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 NET1Q7Z628 596 aaPredicted RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 RELL1Q8IUW5 271 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 CGREF1Q99674 301 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 HNRNPABQ99729 332 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 EIF2AQ9BY44 585 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 NAPBQ9H115 298 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 WHRNQ9P202 907 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 PCDH10Q9P2E7 1040 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 THEGQ9P2T0 379 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 SAP30BPQ9UHR5 308 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 ZFP69BQ9UJL9 534 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 PHTF1Q9UMS5 762 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 COL4A3BPQ9Y5P4 624 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 TACC3Q9Y6A5 838 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 ADAMTSL3P82987 1691 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 ALS2Q96Q42 1657 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 KAT6BQ8WYB5 2073 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 HTR3EA5X5Y0 456 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 PLSCR1O15162 318 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 CDH16O75309 829 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 UBTFL6P0CB48 400 aaPredicted RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 PCP11498 1178 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 CDK4P11802 303 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 ALOX15P16050 662 aaPredicted RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 MCM7P33993 719 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 RPL5P46777 297 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 RPL21P46778 160 aaKnown RBP8.22□□□□□ -1.09
CCR9-201ENST00000355983 MTTPP55157 894 aa8.22□□□□□ -1.09
CCR9-201ENST00000355983 ASIC1P78348 528 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms