RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 KLHL8Q9P2G9 620 aaPredicted RBP13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 FBXO2Q9UK22 296 aaPredicted RBP13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 L1RE1Q9UN81 338 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 AURKCQ9UQB9 309 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 ZNF804BA4D1E1 1349 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 UBN2Q6ZU65 1347 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 A0A1W2PQJ5 194 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 GOLGA8IPA6NC78 632 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 GOLGA8JA6NMD2 632 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 EML4Q9HC35 981 aaKnown RBP13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 STRNO43815 780 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 FMR1Q06787 632 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■■■■□ 26.5
SYNCRIP-201ENST00000355238 SLC20A2Q08357 652 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 STX3Q13277 289 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 UBE2SQ16763 222 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 CARD9Q9H257 536 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 SEL1LQ9UBV2 794 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 ATP7BP35670 1465 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 TMEM247A6NEH6 219 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 TRADDQ15628 312 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 TRIM16LQ309B1 348 aa13.46□□□□□ -0.26
SYNCRIP-201ENST00000355238 CDKL3Q8IVW4 592 aaPredicted RBP13.46□□□□□ -0.26
SYNCRIP-201ENST00000355238 RMDN2Q96LZ7 410 aa13.46□□□□□ -0.26
SYNCRIP-201ENST00000355238 PNKPQ96T60 521 aa13.46□□□□□ -0.26
SYNCRIP-201ENST00000355238 C11orf70Q9BRQ4 267 aa13.46□□□□□ -0.26
SYNCRIP-201ENST00000355238 BEGAINQ9BUH8 593 aa13.46□□□□□ -0.26
SYNCRIP-201ENST00000355238 LY9Q9HBG7 655 aa13.46□□□□□ -0.26
SYNCRIP-201ENST00000355238 HSPA1AP0DMV8 641 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 HSPA1BP0DMV9 641 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 TAP1Q03518 808 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZC3H12BQ5HYM0 836 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 RSRC2Q7L4I2 434 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 SIX6OS1Q8N1H7 587 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 OSBPL8Q9BZF1 889 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 GIMAP4Q9NUV9 329 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 KIF28PB7ZC32 967 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 RTN2O75298 545 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRAMEP78395 509 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 TSTA3Q13630 321 aaPredicted RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 CDO1Q16878 200 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 ACAP3Q96P50 834 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 CPSF3Q9UKF6 684 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 RSPH10B2B2RC85 870 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 O00370 1275 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 SNX2O60749 519 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 TMCC1O94876 653 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 WDR47O94967 919 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 ABL1P00519 1130 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 RSPH10BP0C881 870 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 GCLMP48507 274 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 NLRP11P59045 1033 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 CYB5R4Q7L1T6 521 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 PIGOQ8TEQ8 1089 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 RBM15Q96T37 977 aaKnown RBP eCLIP13.45□□□□□ -0.261e-8■■■□□ 17.7
SYNCRIP-201ENST00000355238 PIH1D3Q9NQM4 214 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRDM4Q9UKN5 801 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 COPG1Q9Y678 874 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 INO80B-WBP1J3KQ70 363 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 HNRNPRO43390 633 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 TBXAS1P24557 533 aaPredicted RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 PPP6R3Q5H9R7 873 aaPredicted RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 HABP4Q5JVS0 413 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 SETD3Q86TU7 594 aaPredicted RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 RHPN2Q8IUC4 686 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 MRPL1Q9BYD6 325 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 INO80BQ9C086 356 aaPredicted RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 AP4S1Q9Y587 144 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 KAT6BQ8WYB5 2073 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 F8W8V4 182 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 RASGRF1Q13972 1273 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 CTTNQ14247 550 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 TBC1D10BQ4KMP7 808 aaPredicted RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 ANKRD40Q6AI12 368 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 PI16Q6UXB8 463 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 DCLRE1BQ9H816 532 aa13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 ALG13Q9NP73 1137 aaKnown RBP13.45□□□□□ -0.26
SYNCRIP-201ENST00000355238 POTEB3A0JP26 581 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 AKAP10O43572 662 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 GHRP10912 638 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZNF18P17022 549 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 VAMP7P51809 220 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 ABCE1P61221 599 aaKnown RBP13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 MDH1BQ5I0G3 518 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 POTEBQ6S5H4 581 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 SERPINB12Q96P63 405 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 AGPAT1Q99943 283 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 TRIM10Q9UDY6 481 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 INPP5FQ9Y2H2 1132 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 HEY1Q9Y5J3 304 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 ASXL2Q76L83 1435 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms