RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SMARCA1P28370 1054 aa14.04□□□□□ -0.16
SCN8A-202ENST00000355133 PDIA2Q13087 525 aaKnown RBP14.04□□□□□ -0.16
SCN8A-202ENST00000355133 ACAD11Q709F0 780 aa14.04□□□□□ -0.16
SCN8A-202ENST00000355133 SMYD3Q9H7B4 428 aa14.04□□□□□ -0.16
SCN8A-202ENST00000355133 HDAC6Q9UBN7 1215 aa14.04□□□□□ -0.16
SCN8A-202ENST00000355133 ABCA8O94911 1581 aa14.04□□□□□ -0.16
SCN8A-202ENST00000355133 UBA6A0AVT1 1052 aaPredicted RBP14.03□□□□□ -0.16
SCN8A-202ENST00000355133 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
SCN8A-202ENST00000355133 ORC4O43929 436 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 KRT14P02533 472 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 KRT7P08729 469 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 EPHA7Q15375 998 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 DUOXA2Q1HG44 320 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 C1orf54Q8WWF1 131 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 OSBPL9Q96SU4 736 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 KDELC2Q7Z4H8 507 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 ZBED8Q8IZ13 594 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 SHROOM2Q13796 1616 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 TTC26A0AVF1 554 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 DNAJC8O75937 253 aaPredicted RBP14.03□□□□□ -0.16
SCN8A-202ENST00000355133 STAT5BP51692 787 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 RAPGEF5Q92565 580 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 NBPF26B4DH59 902 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 TADA3O75528 432 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 PRKCBP05771 671 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 C12orf60Q5U649 245 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 NBPF10Q6P3W6 841 aaKnown RBP14.03□□□□□ -0.16
SCN8A-202ENST00000355133 NBPF15Q8N660 670 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 OR6P1Q8NGX9 317 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 DCTN3O75935 186 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 MYBL1P10243 752 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 CDH6P55285 790 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 PRAMEP78395 509 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 MDM2Q00987 491 aaPredicted RBP14.03□□□□□ -0.16
SCN8A-202ENST00000355133 SHC4Q6S5L8 630 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 TBC1D16Q8TBP0 767 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 HPS3Q969F9 1004 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 NDFIP2Q9NV92 336 aa14.03□□□□□ -0.16
SCN8A-202ENST00000355133 TNS3Q68CZ2 1445 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 HNRNPCL2B2RXH8 293 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 HNRNPCL1O60812 293 aaKnown RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 E2F6O75461 281 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 GUCY2CP25092 1073 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 MAGOHP61326 146 aaKnown RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 ZC3H18Q86VM9 953 aaKnown RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 GUF1Q8N442 669 aaKnown RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 SLC13A1Q9BZW2 595 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 ACTR5Q9H9F9 607 aaPredicted RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 CYP26A1O43174 497 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 GRIK1P39086 918 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 CAV1Q03135 178 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 CEP55Q53EZ4 464 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 RHOT1Q8IXI2 618 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 RAET1EQ8TD07 263 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 EXOC4Q96A65 974 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 NSUN4Q96CB9 384 aaKnown RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 BPIFA3Q9BQP9 254 aa14.02□□□□□ -0.16
SCN8A-202ENST00000355133 DDX56Q9NY93 547 aaKnown RBP14.02□□□□□ -0.16
SCN8A-202ENST00000355133 ATP2C1P98194 919 aaPredicted RBP14.02□□□□□ -0.17
SCN8A-202ENST00000355133 CDKL3Q8IVW4 592 aaPredicted RBP14.02□□□□□ -0.17
SCN8A-202ENST00000355133 TMEM143Q96AN5 459 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 SH3KBP1Q96B97 665 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 FGFR1OP2Q9NVK5 253 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.02□□□□□ -0.17
SCN8A-202ENST00000355133 GYG2O15488 501 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 EYA4O95677 639 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 GGCXP38435 758 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 ITPRIPL1Q6GPH6 555 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 ZNF560Q96MR9 790 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.17
SCN8A-202ENST00000355133 MTA3Q9BTC8 594 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 DAGLAQ9Y4D2 1042 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 CTSHP09668 335 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 PNMA6AP0CW24 399 aaPredicted RBP14.02□□□□□ -0.17
SCN8A-202ENST00000355133 FSCBQ5H9T9 825 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 CLEC10AQ8IUN9 316 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 RMDN1Q96DB5 314 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 CALR3Q96L12 384 aaKnown RBP14.02□□□□□ -0.17
SCN8A-202ENST00000355133 KLHL11Q9NVR0 708 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 DCTN4Q9UJW0 460 aa14.02□□□□□ -0.17
SCN8A-202ENST00000355133 A0A087WUV0 522 aaPredicted RBP14.01□□□□□ -0.17
SCN8A-202ENST00000355133 ANKRD40Q6AI12 368 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 ATXN7L3BQ96GX2 97 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 SCOCQ9UIL1 159 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 FDX1P10109 184 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 RALAP11233 206 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 SKIP12755 728 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 IFNA8P32881 189 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 FBXW4P57775 412 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 BEND6Q5SZJ8 279 aaPredicted RBP14.01□□□□□ -0.17
SCN8A-202ENST00000355133 DHX40Q8IX18 779 aaKnown RBP14.01□□□□□ -0.17
SCN8A-202ENST00000355133 PARVAQ9NVD7 372 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 CNOT7Q9UIV1 285 aaKnown RBP14.01□□□□□ -0.17
SCN8A-202ENST00000355133 ZFP69BQ9UJL9 534 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 PNPLA7Q6ZV29 1317 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 ANO9A1A5B4 782 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 DIAPH2O60879 1101 aa14.01□□□□□ -0.17
SCN8A-202ENST00000355133 VEPH1Q14D04 833 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms