RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 SNX9Q9Y5X1 595 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 PGRMC1O00264 195 aaKnown RBP13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 CEP85LQ5SZL2 805 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 FAM117BQ6P1L5 589 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 FAM76AQ8TAV0 307 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 RNF25Q96BH1 459 aaPredicted RBP13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 C2orf40Q9H1Z8 148 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 VPS33BQ9H267 617 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 KLK14Q9P0G3 267 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 DUSP10Q9Y6W6 482 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 SUPT20HL2P0C7V6 817 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 PPM1FP49593 454 aaPredicted RBP13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 ATP1A2P50993 1020 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 RRP1BQ14684 758 aaKnown RBP13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 MOXD1Q6UVY6 613 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 FAM84AQ96KN4 292 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 TBX20Q9UMR3 447 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 KRT1P04264 644 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 FGFR4P22455 802 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 KLRC1P26715 233 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 ADORA2AP29274 412 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 Q4G0T1 1027 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 SGO2Q562F6 1265 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 PRAMEF19Q5SWL8 479 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 CC2D1AQ6P1N0 951 aaPredicted RBP13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 KCNV1Q6PIU1 500 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 MGARPQ8TDB4 240 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 CPA5Q8WXQ8 436 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 GOLGA6CA6NDK9 693 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 GOLGA6DP0CG33 693 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 GNAT1P11488 350 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 SOX5P35711 763 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 CENPPQ6IPU0 288 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 RFX6Q8HWS3 928 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 PLCD4Q9BRC7 762 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 GOLGA6AQ9NYA3 693 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 APEX2Q9UBZ4 518 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 ADORA2BP29275 332 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 EFNA5P52803 228 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 NCOA4Q13772 614 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 RABGGTAQ92696 567 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 LRRC45Q96CN5 670 aa13.24□□□□□ -0.29
PCDHB11-201ENST00000354757 SPDYE16A6NNV3 312 aaPredicted RBP13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 PDGFRBP09619 1106 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 CYP4F22Q6NT55 531 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 PLEKHH3Q7Z736 793 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 SCN4BQ8IWT1 228 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 CCNYQ8ND76 341 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 LRRN4CLQ8ND94 238 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 HSPH1Q92598 858 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 RPGRIP1Q96KN7 1286 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 DDX47Q9H0S4 455 aaKnown RBP13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 RAB17Q9H0T7 212 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ANKEF1Q9NU02 776 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 GINM1Q9NU53 330 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 KLHL11Q9NVR0 708 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 SGK1O00141 431 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 BRD3Q15059 726 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 TTC19Q6DKK2 380 aaPredicted RBP13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ZNF720Q7Z2F6 126 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 CCDC91Q7Z6B0 441 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 CPLX4Q7Z7G2 160 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 TMEM35BQ8NCS4 154 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 PPP2R3BQ9Y5P8 575 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ALS2Q96Q42 1657 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 IGSF9BQ9UPX0 1349 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 M0QYV0 167 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 KRT15P19012 456 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ADCYAP1R1P41586 468 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ALDH5A1P51649 535 aaPredicted RBP13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ECM1Q16610 540 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ATF7IP2Q5U623 682 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 CATSPERGQ6ZRH7 1159 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 CCDC60Q8IWA6 550 aaPredicted RBP13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ACAP3Q96P50 834 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 ATP8A1Q9Y2Q0 1164 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 SCN11AQ9UI33 1791 aa13.23□□□□□ -0.29
PCDHB11-201ENST00000354757 CXCL11O14625 94 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 HBP1O60381 514 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 HLA-DRAP01903 254 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 EZRP15311 586 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 SARSP49591 514 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 SURF1Q15526 300 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 AMHR2Q16671 573 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 EXOC4Q96A65 974 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 MRPL47Q9HD33 250 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 SETD4Q9NVD3 440 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 A8MXQ7 604 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 UPP2O95045 317 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 RGS7P49802 495 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 ERVK-9P63128 1117 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 ERVK-24P63145 666 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms