RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 C12orf56Q8IXR9 622 aa12.27□□□□□ -0.45
CAPN9-202ENST00000354537 ZDHHC14Q8IZN3 488 aa12.27□□□□□ -0.45
CAPN9-202ENST00000354537 KRT35Q92764 455 aa12.27□□□□□ -0.45
CAPN9-202ENST00000354537 DDX4Q9NQI0 724 aaKnown RBP12.27□□□□□ -0.45
CAPN9-202ENST00000354537 ABCF3Q9NUQ8 709 aa12.27□□□□□ -0.45
CAPN9-202ENST00000354537 AGAP1Q9UPQ3 857 aa12.27□□□□□ -0.45
CAPN9-202ENST00000354537 FSCN2O14926 492 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 CYP1A2P05177 515 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 PPP2R5CQ13362 524 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 RHBDF2Q6PJF5 856 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 ASRGL1Q7L266 308 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 MIGA2Q7L4E1 593 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 CCDC105Q8IYK2 499 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 NSMCE1Q8WV22 266 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 DYDC1Q8WWB3 177 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 ARHGEF2Q92974 986 aaKnown RBP12.26□□□□□ -0.45
CAPN9-202ENST00000354537 NACC1Q96RE7 527 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 P2RX7Q99572 595 aaKnown RBP12.26□□□□□ -0.45
CAPN9-202ENST00000354537 TRIM7Q9C029 511 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 COA1Q9GZY4 146 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 UVRAGQ9P2Y5 699 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 LGALS13Q9UHV8 139 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 ATP5HO75947 161 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 SLITRK3O94933 977 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 SCP2P22307 547 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 FGFR4P22455 802 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 PDE6BP35913 854 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 RWDD2BP57060 319 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 PPARDQ03181 441 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
CAPN9-202ENST00000354537 HHIPL2Q6UWX4 724 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 SPATA21Q7Z572 469 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 FAM178BQ8IXR5 827 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 C7orf43Q8WVR3 580 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 CNKSR1Q969H4 720 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 STAMBPL1Q96FJ0 436 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 GMCL1Q96IK5 515 aa12.26□□□□□ -0.45
CAPN9-202ENST00000354537 SEPT11Q9NVA2 429 aaKnown RBP12.26□□□□□ -0.45
CAPN9-202ENST00000354537 TCP11X1B4DZS4 312 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 EML1O00423 815 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 MPHOSPH10O00566 681 aaKnown RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 PYGMP11217 842 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 CCNB1P14635 433 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 HOXA10P31260 410 aaPredicted RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 SNRPFP62306 86 aaKnown RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 MAP2K1Q02750 393 aaPredicted RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 ARHGAP44Q17R89 818 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 ACCSLQ4AC99 568 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 VSTM1Q6UX27 236 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 CEP128Q6ZU80 1094 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 PALB2Q86YC2 1186 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 RELL1Q8IUW5 271 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 BANK1Q8NDB2 785 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 AGAP11Q8TF27 550 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 TBC1D31Q96DN5 1066 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 MAGEB18Q96M61 343 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 TRIM6Q9C030 488 aaPredicted RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 MTFR1LQ9H019 292 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 CDC42EP4Q9H3Q1 356 aaKnown RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 DBR1Q9UK59 544 aaKnown RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 IGLV3-22A0A075B6J6 115 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 TMEM120BA0PK00 339 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 SMIM23A6NLE4 172 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 EXOC3O60645 756 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 ALDH5A1P51649 535 aaPredicted RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 CYP4A11Q02928 519 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 EPC2Q52LR7 807 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 ZC2HC1CQ53FD0 456 aaPredicted RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 ARHGEF18Q6ZSZ5 1173 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 RPUSD2Q8IZ73 545 aaKnown RBP12.25□□□□□ -0.45
CAPN9-202ENST00000354537 SLC5A5Q92911 643 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 KLHL29Q96CT2 875 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 FAXDC2Q96IV6 333 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 TMEM206Q9H813 350 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 GTF3C4Q9UKN8 822 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 SYNPO2Q9UMS6 1093 aa12.25□□□□□ -0.45
CAPN9-202ENST00000354537 IGF2BP3O00425 579 aaKnown RBP eCLIP12.24□□□□□ -0.45
CAPN9-202ENST00000354537 PSMD10O75832 226 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 TTC4O95801 387 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 EEF2P13639 858 aaKnown RBP12.24□□□□□ -0.45
CAPN9-202ENST00000354537 ZNF76P36508 570 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 IFNAR2P48551 515 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 LACTBP83111 547 aaPredicted RBP12.24□□□□□ -0.45
CAPN9-202ENST00000354537 MYO1EQ12965 1108 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
CAPN9-202ENST00000354537 PTK6Q13882 451 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
CAPN9-202ENST00000354537 TRAPPC3LQ5T215 181 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 AADACL2Q6P093 401 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 PPP1R21Q6ZMI0 780 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 BBOF1Q8ND07 529 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 GRK7Q8WTQ7 553 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 RAB3IPQ96QF0 476 aaPredicted RBP12.24□□□□□ -0.45
CAPN9-202ENST00000354537 UIMC1Q96RL1 719 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 CRAMP1Q96RY5 1269 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 FOXP3Q9BZS1 431 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 DNAJC18Q9H819 358 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms