RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 NPHS2Q9NP85 383 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 GCNT4Q9P109 453 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 SOAT1P35610 550 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 PSMC2P35998 433 aaKnown RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 ARMC4Q5T2S8 1044 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 ZNF57Q68EA5 555 aaPredicted RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 IKBIPQ70UQ0 350 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 RASSF5Q8WWW0 418 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 RSPH1Q8WYR4 309 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 PCDHA13Q9Y5I0 950 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 IRS4O14654 1257 aaPredicted RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 PFKFB1P16118 471 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 CDC25BP30305 580 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 TAF5Q15542 800 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 TERF2Q15554 542 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 ARHGEF25Q86VW2 580 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 WDR36Q8NI36 951 aaKnown RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 PANX2Q96RD6 677 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 POLR1BQ9H9Y6 1135 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 UFL1O94874 794 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 RBM6P78332 1123 aaKnown RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 CHSY1Q86X52 802 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 NOL6Q9H6R4 1146 aaKnown RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 AVENQ9NQS1 362 aaPredicted RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 RPN2P04844 631 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PSMA2P25787 234 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 ZNF786Q8N393 782 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 TTC7AQ9ULT0 858 aaPredicted RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PYCARDQ9ULZ3 195 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PNMA6AP0CW24 399 aaPredicted RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 HSMCR30P0CW71 290 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PSMC3P17980 439 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 STARP49675 285 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 ARL4CP56559 192 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 ZMYM3Q14202 1370 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 ZNF284Q2VY69 593 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 OR6B2Q6IFH4 312 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PPIP5K1Q6PFW1 1433 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 CCDC162PA2VCL2 907 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 EIF3DO15371 548 aaKnown RBP eCLIP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 GUCA1AP43080 201 aaPredicted RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 DSG1Q02413 1049 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PTPN21Q16825 1174 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 RNFT2Q96EX2 444 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 LRFN2Q9ULH4 789 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 A0A0B4J269 797 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 BAIAP3O94812 1187 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 TUBB3Q13509 450 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 NLRP14Q86W24 1093 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 RPRD1BQ9NQG5 326 aaKnown RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 MCM8Q9UJA3 840 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 TFAMQ00059 246 aaKnown RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 CCNIQ14094 377 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 RAB42Q8N4Z0 105 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 STOML2Q9UJZ1 356 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 COL4A3BPQ9Y5P4 624 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 TCP11X1B4DZS4 312 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 C6orf10Q5SRN2 563 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 ADALQ6DHV7 355 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 HEXIM2Q96MH2 286 aaKnown RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 GCOM2Q9BZD3 368 aaPredicted RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 FKBP14Q9NWM8 211 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 DISP3Q9P2K9 1392 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 FAPQ12884 760 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PARP10Q53GL7 1025 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 DGKKQ5KSL6 1271 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 SDE2Q6IQ49 451 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 PPM1NQ8N819 430 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 RMDN1Q96DB5 314 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 HNRNPDLO14979 420 aaKnown RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 NDUFB5O43674 189 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 C16orf89Q6UX73 402 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 SLITRK6Q9H5Y7 841 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 IL1RL2Q9HB29 575 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 MAFFQ9ULX9 164 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 CTTNBP2Q8WZ74 1663 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 IQCMA0A1B0GVH7 501 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 MAPK11Q15759 364 aa8.48□□□□□ -1.05
SCN8A-201ENST00000354534 ZNF624Q9P2J8 865 aaPredicted RBP8.48□□□□□ -1.05
SCN8A-201ENST00000354534 JAK2O60674 1132 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 NR1H3Q13133 447 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 WLSQ5T9L3 541 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 IFNEQ86WN2 208 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 POMGNT2Q8NAT1 580 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 SEC16BQ96JE7 1060 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 CNDP1Q96KN2 507 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 TNIP3Q96KP6 325 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 MNTQ99583 582 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 STK39Q9UEW8 545 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 AP4S1Q9Y587 144 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 NOS1P29475 1434 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 POLR3AO14802 1390 aaPredicted RBP8.47□□□□□ -1.05
SCN8A-201ENST00000354534 FLT4P35916 1363 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 CAND2O75155 1236 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 KLHL38Q2WGJ6 581 aa8.47□□□□□ -1.05
SCN8A-201ENST00000354534 TPTE2Q6XPS3 522 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms