RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 LMNB2Q03252 620 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 DMTNQ08495 405 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 HTR4Q13639 388 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 COL9A3Q14050 684 aaPredicted RBP12.57□□□□□ -0.4
RTN3-204ENST00000354497 UGCGQ16739 394 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 CYP26C1Q6V0L0 522 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 TAS1R1Q7RTX1 841 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 RHPN2Q8IUC4 686 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 NLRP4Q96MN2 994 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 SH2D3AQ9BRG2 576 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 TMEM175Q9BSA9 504 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 INO80BQ9C086 356 aaPredicted RBP12.57□□□□□ -0.4
RTN3-204ENST00000354497 GLT8D2Q9H1C3 349 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 RSAD1Q9HA92 442 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 DISC1Q9NRI5 854 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 RBM28Q9NW13 759 aaKnown RBP12.57□□□□□ -0.4
RTN3-204ENST00000354497 PCDHB2Q9Y5E7 798 aa12.57□□□□□ -0.4
RTN3-204ENST00000354497 GOLGA6L3A6NEY3 463 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 PRR5-ARHGAP8B1AHC4 643 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 GPC5P78333 572 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 ARHGAP8P85298 464 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 SLC20A2Q08357 652 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 ZNF528Q3MIS6 628 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 ZNF707Q96C28 371 aaPredicted RBP12.56□□□□□ -0.4
RTN3-204ENST00000354497 GTPBP4Q9BZE4 634 aaKnown RBP12.56□□□□□ -0.4
RTN3-204ENST00000354497 SLC2A4RGQ9NR83 387 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 BARHL2Q9NY43 387 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.56□□□□□ -0.43e-15■■■■□ 23
RTN3-204ENST00000354497 SUCLA2Q9P2R7 463 aaPredicted RBP12.56□□□□□ -0.4
RTN3-204ENST00000354497 FBXO4Q9UKT5 387 aa12.56□□□□□ -0.4
RTN3-204ENST00000354497 ZFHX4Q86UP3 3567 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 KANSL1LA0AUZ9 987 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 TMEM150BA6NC51 233 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 hCG_1984214I3L0E3 225 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 SGSM2O43147 1006 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 CYP3A4P08684 503 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 FSHRP23945 695 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 AFF1P51825 1210 aaKnown RBP12.55□□□□□ -0.4
RTN3-204ENST00000354497 STARD6P59095 220 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 RTN1Q16799 776 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 AGMOQ6ZNB7 445 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 KSR1Q8IVT5 923 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
RTN3-204ENST00000354497 RTKNQ9BST9 563 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 TRAIPQ9BWF2 469 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 NT5C3AQ9H0P0 336 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 KANSL3Q9P2N6 904 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 GMEB2Q9UKD1 530 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
RTN3-204ENST00000354497 PCDHGA2Q9Y5H1 932 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 KMT2BQ9UMN6 2715 aaPredicted RBP12.55□□□□□ -0.4
RTN3-204ENST00000354497 COL4A3Q01955 1670 aa12.55□□□□□ -0.4
RTN3-204ENST00000354497 FAM170BA6NMN3 283 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 ANHXE9PGG2 379 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 GAS2O43903 313 aaKnown RBP12.54□□□□□ -0.4
RTN3-204ENST00000354497 CD72P21854 359 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 CDC42EP1Q00587 391 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 MLF2Q15773 248 aaPredicted RBP12.54□□□□□ -0.4
RTN3-204ENST00000354497 TSSK4Q6SA08 328 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 PARM1Q6UWI2 310 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 ZNF410Q86VK4 478 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 B3GALT6Q96L58 329 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
RTN3-204ENST00000354497 MARCH5Q9NX47 278 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 CNTNAP2Q9UHC6 1331 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 FRYLO94915 3013 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 GOLGA8AA7E2F4 631 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 SLC27A2O14975 620 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 ZBTB43O43298 467 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 TGM5O43548 720 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 GAS7O60861 476 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 ZNF623O75123 536 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 LPAL2Q16609 132 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 SLC44A4Q53GD3 710 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 APOA5Q6Q788 366 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 REXO1Q8N1G1 1221 aaKnown RBP12.54□□□□□ -0.4
RTN3-204ENST00000354497 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
RTN3-204ENST00000354497 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 FGF14Q92915 247 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 GJA10Q969M2 543 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 TEKT3Q9BXF9 490 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 RHOBTB2Q9BYZ6 727 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 PRKD2Q9BZL6 878 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 UNC45AQ9H3U1 944 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 PLEKHA4Q9H4M7 779 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 C6orf50Q9HD87 102 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 ZSCAN32Q9NX65 697 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 ZDHHC7Q9NXF8 308 aa12.54□□□□□ -0.4
RTN3-204ENST00000354497 EPG5Q9HCE0 2579 aa12.53□□□□□ -0.4
RTN3-204ENST00000354497 MYH9P35579 1960 aaKnown RBP12.53□□□□□ -0.4
RTN3-204ENST00000354497 DDX11L8A8MPP1 907 aa12.53□□□□□ -0.4
RTN3-204ENST00000354497 F8W810 466 aa12.53□□□□□ -0.4
RTN3-204ENST00000354497 ADAMTS3O15072 1205 aa12.53□□□□□ -0.4
RTN3-204ENST00000354497 NR1I2O75469 434 aa12.53□□□□□ -0.4
RTN3-204ENST00000354497 ADRB1P08588 477 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms