RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 MXD4Q14582 209 aaPredicted RBP12.76□□□□□ -0.37
CDRT1-202ENST00000354433 TTC38Q5R3I4 469 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 RESP18Q5W5W9 173 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 MAEAQ7L5Y9 396 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 TMC7Q7Z402 723 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 EFHBQ8N7U6 833 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 ANP32BQ92688 251 aaKnown RBP12.76□□□□□ -0.37
CDRT1-202ENST00000354433 TMEM169Q96HH4 297 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 MINDY3Q9H8M7 445 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 XPNPEP1Q9NQW7 623 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 ANKEF1Q9NU02 776 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 SPG21Q9NZD8 308 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 LZTS1Q9Y250 596 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 HPSEQ9Y251 543 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 PCDHB2Q9Y5E7 798 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
CDRT1-202ENST00000354433 A0A087WWV3 80 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 MEIS3P2A8K0S8 358 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 MBTPS2O43462 519 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 LYPLA2O95372 231 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 MARCKSP29966 332 aaPredicted RBP12.75□□□□□ -0.37
CDRT1-202ENST00000354433 BCAR1P56945 870 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 ADAM15Q13444 863 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
CDRT1-202ENST00000354433 HAUS3Q68CZ6 603 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 PDE12Q6L8Q7 609 aaKnown RBP12.75□□□□□ -0.37
CDRT1-202ENST00000354433 ELOA2Q8IYF1 753 aaPredicted RBP12.75□□□□□ -0.37
CDRT1-202ENST00000354433 URGCPQ8TCY9 931 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 RSPH1Q8WYR4 309 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 TRAIPQ9BWF2 469 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
CDRT1-202ENST00000354433 EPHX3Q9H6B9 360 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 CD320Q9NPF0 282 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 FBXO2Q9UK22 296 aaPredicted RBP12.75□□□□□ -0.37
CDRT1-202ENST00000354433 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 ATG2AQ2TAZ0 1938 aa12.75□□□□□ -0.37
CDRT1-202ENST00000354433 PLXNA4Q9HCM2 1894 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 A0A1B0GVL5 298 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 NDUFA8P51970 172 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 ORC2Q13416 577 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-202ENST00000354433 SMAD2Q15796 467 aaKnown RBP12.74□□□□□ -0.37
CDRT1-202ENST00000354433 CAMK4Q16566 473 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 NOMO2Q5JPE7 1267 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 NOTUMQ6P988 496 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 SHC4Q6S5L8 630 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 CATSPER3Q86XQ3 398 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 SLC39A11Q8N1S5 342 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 ASAP3Q8TDY4 903 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 POP1Q99575 1024 aaKnown RBP12.74□□□□□ -0.37
CDRT1-202ENST00000354433 CDCA3Q99618 268 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-202ENST00000354433 TRIM6Q9C030 488 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-202ENST00000354433 TUFT1Q9NNX1 390 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 NGRNQ9NPE2 291 aaKnown RBP12.74□□□□□ -0.37
CDRT1-202ENST00000354433 TBC1D13Q9NVG8 400 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 BDP1A6H8Y1 2624 aa12.74□□□□□ -0.37
CDRT1-202ENST00000354433 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 FSCN2O14926 492 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 TSPAN1O60635 241 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 MED24O75448 989 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 GLP2RO95838 553 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 PFKFB1P16118 471 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 COL9A1P20849 921 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 PTENP60484 403 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
CDRT1-202ENST00000354433 ZP2Q05996 745 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 CAPSQ13938 189 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 SMC1AQ14683 1233 aaKnown RBP12.73□□□□□ -0.37
CDRT1-202ENST00000354433 DUSP6Q16828 381 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 SASS6Q6UVJ0 657 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 ADHFE1Q8IWW8 467 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDRT1-202ENST00000354433 CPB2Q96IY4 423 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 FAM193BQ96PV7 902 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-202ENST00000354433 FAM13BQ9NYF5 915 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 CLEC1BQ9P126 229 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 CARNS1A5YM72 827 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 HIDE1A8MVS5 230 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 ZNF623O75123 536 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 OFD1O75665 1012 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 ZNF202O95125 648 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 POMCP01189 267 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 GLRA2P23416 452 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 SYKP43405 635 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 ATP2C1P98194 919 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-202ENST00000354433 TYRO3Q06418 890 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 PCBP1Q15365 356 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDRT1-202ENST00000354433 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 ARL6IP4Q66PJ3 421 aaKnown RBP12.73□□□□□ -0.37
CDRT1-202ENST00000354433 SMRP1Q8NCR6 262 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 MCPH1Q8NEM0 835 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 MSLNLQ96KJ4 702 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 APOL6Q9BWW8 343 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 NRDE2Q9H7Z3 1164 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms