RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 UGCGQ16739 394 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 SYNE3Q6ZMZ3 975 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 GRASPQ7Z6J2 395 aaPredicted RBP17.81■□□□□ 0.44
DDX55-202ENST00000354291 KSR1Q8IVT5 923 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 B3GALT6Q96L58 329 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 SH2D3AQ9BRG2 576 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 OSBPL6Q9BZF3 934 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 LTB4R2Q9NPC1 389 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 ANO2Q9NQ90 1003 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 MARCH5Q9NX47 278 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 ZDHHC7Q9NXF8 308 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 RAB23Q9ULC3 237 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 ZFP37Q9Y6Q3 630 aaPredicted RBP17.81■□□□□ 0.44
DDX55-202ENST00000354291 CHMP2AO43633 222 aa17.8■□□□□ 0.44
DDX55-202ENST00000354291 MAGEA9P43362 315 aa17.8■□□□□ 0.44
DDX55-202ENST00000354291 NTHL1P78549 312 aa17.8■□□□□ 0.44
DDX55-202ENST00000354291 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
DDX55-202ENST00000354291 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
DDX55-202ENST00000354291 BARHL2Q9NY43 387 aa17.8■□□□□ 0.44
DDX55-202ENST00000354291 SEPT9Q9UHD8 586 aaPredicted RBP17.8■□□□□ 0.44
DDX55-202ENST00000354291 CDH7Q9ULB5 785 aa17.8■□□□□ 0.44
DDX55-202ENST00000354291 CNOT1A5YKK6 2376 aaKnown RBP17.8■□□□□ 0.44
DDX55-202ENST00000354291 CNTNAP5Q8WYK1 1306 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 TMEM150BA6NC51 233 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 SLC30A4O14863 429 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 NCAM2O15394 837 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 DSG1Q02413 1049 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 TARBP2Q15633 366 aaKnown RBP17.79■□□□□ 0.44
DDX55-202ENST00000354291 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 MRPL10Q7Z7H8 261 aaKnown RBP17.79■□□□□ 0.44
DDX55-202ENST00000354291 ZNF410Q86VK4 478 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 NETO1Q8TDF5 533 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 NELL1Q92832 810 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 FAM208BQ5VWN6 2430 aa17.79■□□□□ 0.44
DDX55-202ENST00000354291 MIA3Q5JRA6 1907 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 COL4A3Q01955 1670 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 F8W810 466 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 RPL17P18621 184 aaKnown RBP17.78■□□□□ 0.44
DDX55-202ENST00000354291 TARSP26639 723 aaKnown RBP17.78■□□□□ 0.44
DDX55-202ENST00000354291 PFKPQ01813 784 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 DMWDQ09019 674 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 LILRA6Q6PI73 481 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 RSPO2Q6UXX9 243 aaPredicted RBP17.78■□□□□ 0.44
DDX55-202ENST00000354291 TPRG1Q6ZUI0 275 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 COLGALT2Q8IYK4 626 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 CRYGNQ8WXF5 182 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 NELL2Q99435 816 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 KXD1Q9BQD3 176 aa17.78■□□□□ 0.44
DDX55-202ENST00000354291 FAM217BQ9NTX9 383 aaPredicted RBP17.78■□□□□ 0.44
DDX55-202ENST00000354291 CNTNAP2Q9UHC6 1331 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 ADAMTS3O15072 1205 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 NR1I2O75469 434 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 ZMYND10O75800 440 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 PAPLNO95428 1278 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 FGF13Q92913 245 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 CLDN23Q96B33 292 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 NIFKQ9BYG3 293 aaKnown RBP17.77■□□□□ 0.44
DDX55-202ENST00000354291 CHST7Q9NS84 486 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 AGPAT5Q9NUQ2 364 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.44
DDX55-202ENST00000354291 POLIQ9UNA4 740 aa17.77■□□□□ 0.44
DDX55-202ENST00000354291 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 IGKV6-21A0A0C4DH24 114 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 DDX11L8A8MPP1 907 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 hCG_1984214I3L0E3 225 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 ITGA4P13612 1032 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 MTAPQ13126 283 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 PRR23BQ6ZRT6 265 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 RNF168Q8IYW5 571 aaPredicted RBP17.76■□□□□ 0.43
DDX55-202ENST00000354291 ZNF713Q8N859 430 aaPredicted RBP17.76■□□□□ 0.43
DDX55-202ENST00000354291 COLEC11Q9BWP8 271 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 FAM126AQ9BYI3 521 aaPredicted RBP17.76■□□□□ 0.43
DDX55-202ENST00000354291 GPR62Q9BZJ7 368 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDX55-202ENST00000354291 ANGPTL2Q9UKU9 493 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 FRYQ5TBA9 3013 aa17.76■□□□□ 0.43
DDX55-202ENST00000354291 GAS7O60861 476 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 EFEMP2O95967 443 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 C1RP00736 705 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 SRGAP2CP0DJJ0 459 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 NRLP54845 237 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 FUT2Q10981 343 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 RTN1Q16799 776 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 USP41Q3LFD5 358 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 XKR3Q5GH77 459 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 UBXN11Q5T124 520 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 LAIR1Q6GTX8 287 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 ZNF852Q6ZMS4 543 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 CELF5Q8N6W0 485 aaKnown RBP17.75■□□□□ 0.43
DDX55-202ENST00000354291 ITFG1Q8TB96 612 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 GJA10Q969M2 543 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 CEP89Q96ST8 783 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 GAD1Q99259 594 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 PHF20Q9BVI0 1012 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 UNC45AQ9H3U1 944 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 UBN1Q9NPG3 1134 aa17.75■□□□□ 0.43
DDX55-202ENST00000354291 PRMT8Q9NR22 394 aaPredicted RBP17.75■□□□□ 0.43
DDX55-202ENST00000354291 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
DDX55-202ENST00000354291 MIOSQ9NXC5 875 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms