RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 EXTL3O43909 919 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 NOL4O94818 638 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 ACTN1P12814 892 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 FECHP22830 423 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 PON1P27169 355 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 CLCN1P35523 988 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 PHKA2P46019 1235 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 PTENP60484 403 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 MYL7Q01449 175 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 E4F1Q66K89 784 aaPredicted RBP22.35■■□□□ 1.17
TRIM4-202ENST00000354241 NFRKBQ6P4R8 1299 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 CYP26C1Q6V0L0 522 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 ZPBP2Q6X784 338 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 KATNAL1Q9BW62 490 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 HAPLN2Q9GZV7 340 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 NLRC4Q9NPP4 1024 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 TRMT1Q9NXH9 659 aaKnown RBP22.35■■□□□ 1.17
TRIM4-202ENST00000354241 NRCAMQ92823 1304 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 TTLL13PA6NNM8 815 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 USP27XA6NNY8 438 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 HAS3O00219 553 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 RARBP10826 455 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 GJA9P57773 515 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 POLR2FP61218 127 aaKnown RBP22.35■■□□□ 1.17
TRIM4-202ENST00000354241 MTF1Q14872 753 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 RRAGAQ7L523 313 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 TMTC1Q8IUR5 882 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 CCDC127Q96BQ5 260 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 MSTO1Q9BUK6 570 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 EDEM3Q9BZQ6 932 aa22.35■■□□□ 1.17
TRIM4-202ENST00000354241 ZNHIT6Q9NWK9 470 aaKnown RBP22.35■■□□□ 1.17
TRIM4-202ENST00000354241 THSD7BQ9C0I4 1608 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 A0A087WZ62 844 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 KIAA0391O15091 583 aaKnown RBP22.34■■□□□ 1.17
TRIM4-202ENST00000354241 HARSP12081 509 aaKnown RBP22.34■■□□□ 1.17
TRIM4-202ENST00000354241 PRKAR2AP13861 404 aaKnown RBP22.34■■□□□ 1.17
TRIM4-202ENST00000354241 CCND3P30281 292 aaPredicted RBP22.34■■□□□ 1.17
TRIM4-202ENST00000354241 PURAQ00577 322 aaKnown RBP22.34■■□□□ 1.17
TRIM4-202ENST00000354241 MBTD1Q05BQ5 628 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 CYP24A1Q07973 514 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 GNASQ5JWF2 1037 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 CCAR2Q8N163 923 aaKnown RBP22.34■■□□□ 1.17
TRIM4-202ENST00000354241 MFSD14AQ96MC6 490 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 SCLT1Q96NL6 688 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 FDXACB1Q9BRP7 624 aaPredicted RBP22.34■■□□□ 1.17
TRIM4-202ENST00000354241 GANQ9H2C0 597 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 SPC25Q9HBM1 224 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 KIAA1586Q9HCI6 787 aa22.34■■□□□ 1.17
TRIM4-202ENST00000354241 ZNF233A6NK53 670 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 PGK1P00558 417 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 GCLMP48507 274 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 PPP3CAQ08209 521 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 TMEM132AQ24JP5 1023 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 C1orf220Q5T0J3 134 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 RAD9BQ6WBX8 426 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 NLRP7Q8WX94 980 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 BAP1Q92560 729 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 ACO2Q99798 780 aaKnown RBP22.33■■□□□ 1.17
TRIM4-202ENST00000354241 NFKBIZQ9BYH8 718 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 FZD8Q9H461 694 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 MINDY3Q9H8M7 445 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 IFT122Q9HBG6 1241 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 PLCB1Q9NQ66 1216 aa22.33■■□□□ 1.17
TRIM4-202ENST00000354241 LRRC53A6NM62 1247 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 CLDN3O15551 220 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 N4BP1O75113 896 aaKnown RBP22.33■■□□□ 1.16
TRIM4-202ENST00000354241 NLRP11P59045 1033 aaKnown RBP22.33■■□□□ 1.16
TRIM4-202ENST00000354241 POU5F1BQ06416 359 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 PDXDC1Q6P996 788 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 WDR59Q6PJI9 974 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 TOGARAM2Q6ZUX3 1019 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 ZBTB33Q86T24 672 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 KIAA0319LQ8IZA0 1049 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 RAET1EQ8TD07 263 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 CHP1Q99653 195 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 TCHPQ9BT92 498 aa22.33■■□□□ 1.16
TRIM4-202ENST00000354241 FAM49AQ9H0Q0 323 aaPredicted RBP22.33■■□□□ 1.16
TRIM4-202ENST00000354241 A0A0B4J269 797 aa22.32■■□□□ 1.16
TRIM4-202ENST00000354241 ACKR2O00590 384 aa22.32■■□□□ 1.16
TRIM4-202ENST00000354241 LDHAP00338 332 aaKnown RBP22.32■■□□□ 1.16
TRIM4-202ENST00000354241 ACOT2P49753 483 aa22.32■■□□□ 1.16
TRIM4-202ENST00000354241 PRPF4BQ13523 1007 aaKnown RBP22.32■■□□□ 1.16
TRIM4-202ENST00000354241 KLHDC7AQ5VTJ3 777 aa22.32■■□□□ 1.16
TRIM4-202ENST00000354241 USP37Q86T82 979 aa22.32■■□□□ 1.16
TRIM4-202ENST00000354241 TMC2Q8TDI7 906 aa22.32■■□□□ 1.16
TRIM4-202ENST00000354241 PARD3BQ8TEW8 1205 aa22.32■■□□□ 1.16
TRIM4-202ENST00000354241 ERO1AQ96HE7 468 aa22.32■■□□□ 1.16
TRIM4-202ENST00000354241 UPF3AQ9H1J1 476 aaKnown RBP22.32■■□□□ 1.16
TRIM4-202ENST00000354241 TRIP12Q14669 1992 aaPredicted RBP22.32■■□□□ 1.16
TRIM4-202ENST00000354241 LRRIQ3A6PVS8 624 aaPredicted RBP22.31■■□□□ 1.16
TRIM4-202ENST00000354241 B4GALT5O43286 388 aa22.31■■□□□ 1.16
TRIM4-202ENST00000354241 ZEB2O60315 1214 aa22.31■■□□□ 1.16
TRIM4-202ENST00000354241 KPNA6O60684 536 aa22.31■■□□□ 1.16
TRIM4-202ENST00000354241 TOM1L1O75674 476 aa22.31■■□□□ 1.16
TRIM4-202ENST00000354241 DPY19L2P1Q6NXN4 242 aa22.31■■□□□ 1.16
TRIM4-202ENST00000354241 DESI2Q9BSY9 194 aa22.31■■□□□ 1.16
TRIM4-202ENST00000354241 SIX2Q9NPC8 291 aa22.31■■□□□ 1.16
TRIM4-202ENST00000354241 KCND1Q9NSA2 647 aa22.31■■□□□ 1.16
TRIM4-202ENST00000354241 PRMT7Q9NVM4 692 aaPredicted RBP22.31■■□□□ 1.16
TRIM4-202ENST00000354241 FKTNO75072 461 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms