RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PTPN4P29074 926 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 NAA20P61599 178 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 DSG1Q02413 1049 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 FKBP4Q02790 459 aaKnown RBP eCLIP11.39□□□□□ -0.59
CAPN3-203ENST00000349748 TBL3Q12788 808 aaKnown RBP11.39□□□□□ -0.59
CAPN3-203ENST00000349748 PTGDRQ13258 359 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 ACVR2BQ13705 512 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 SHISA4Q96DD7 197 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 ECSITQ9BQ95 431 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 CCDC28BQ9BUN5 200 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 DNAJC17Q9NVM6 304 aaKnown RBP11.39□□□□□ -0.59
CAPN3-203ENST00000349748 IL1RAPL1Q9NZN1 696 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 PLCH1Q4KWH8 1693 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 A0A087WZG4 1122 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 A0A087X0T9 212 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 KANSL1LA0AUZ9 987 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 FBP2O00757 339 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 ZFYP08048 801 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 FAM228BP0C875 321 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 TAC1P20366 129 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 CASP7P55210 303 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 PDE1BQ01064 536 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 DMPKQ09013 629 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 THOC5Q13769 683 aaKnown RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 KIF22Q14807 665 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 TNFAIP8L3Q5GJ75 292 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 LMBR1LQ6UX01 489 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 DGCR14Q96DF8 476 aaKnown RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 FNBP1Q96RU3 617 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 CYTH2Q99418 400 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 HNRNPABQ99729 332 aaKnown RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 SLCO1B3Q9NPD5 702 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 ADAMTS1Q9UHI8 967 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 HEMK1Q9Y5R4 338 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 NUMBLQ9Y6R0 609 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 ADAMTS7Q9UKP4 1686 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 TLR2O60603 784 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 EXOC3O60645 756 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 USP1O94782 785 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 AMPD1P23109 780 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 HOXA10P31260 410 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 YARSP54577 528 aaKnown RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 DNAJC3Q13217 504 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 TMEM67Q5HYA8 995 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 ZNF772Q68DY9 489 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 PDXDC1Q6P996 788 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 KLHDC10Q6PID8 442 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 ZDHHC24Q6UX98 284 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 ATG9AQ7Z3C6 839 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 IRGQQ8WZA9 623 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 PUS7LQ9H0K6 701 aaKnown RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 SLITRK6Q9H5Y7 841 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 METTL14Q9HCE5 456 aaKnown RBP11.38□□□□□ -0.59
CAPN3-203ENST00000349748 ZNF148Q9UQR1 794 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
CAPN3-203ENST00000349748 NBPF26B4DH59 902 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 MAPK13O15264 365 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 ADAM23O75077 832 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 EYA4O95677 639 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 SNRPA1P09661 255 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 SERPINB8P50452 374 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 RELAQ04206 551 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 TCIRG1Q13488 830 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 LRRC36Q1X8D7 754 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 ZSCAN29Q8IWY8 852 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 SCYL3Q8IZE3 742 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 U2AF1L4Q8WU68 220 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 ERLEC1Q96DZ1 483 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 STMN4Q9H169 189 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 SYNCQ9H7C4 482 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 LY9Q9HBG7 655 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 AIPL1Q9NZN9 384 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 ZNF212Q9UDV6 495 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 FAM32AQ9Y421 112 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 N6AMT1Q9Y5N5 214 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 SLC12A7Q9Y666 1083 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 SMIM31A0A1B0GVY4 71 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 CCDC188H7C350 402 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 BRAFP15056 766 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 CDC16Q13042 620 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 IL17AQ16552 155 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 NELFCDQ8IXH7 590 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 TMCO5AQ8N6Q1 288 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 PPP1R10Q96QC0 940 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 TUBA8Q9NY65 449 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 EURLQ9NYK6 297 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 CEP72Q9P209 647 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 TMA7Q9Y2S6 64 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 FAM170AA1A519 330 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 BAG2O95816 211 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 FGGP02679 453 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 IFIT1P09914 478 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 TFPTP0C1Z6 253 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 MAP3K10Q02779 954 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms