RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RSAD1Q9HA92 442 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 AAASQ9NRG9 546 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 PLAGL2Q9UPG8 496 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 REV3LO60673 3130 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 ZMYM2Q9UBW7 1377 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 K7ERI5 159 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 N4BP3O15049 544 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 GRM6O15303 877 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 ITGB1P05556 798 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 CACNB1Q02641 598 aaPredicted RBP24.34■■□□□ 1.49
SNX3-202ENST00000349379 DHX8Q14562 1220 aaKnown RBP24.34■■□□□ 1.49
SNX3-202ENST00000349379 NT5DC1Q5TFE4 455 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 KLHL23Q8NBE8 558 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 TMEM161BQ8NDZ6 487 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 USP20Q9Y2K6 914 aa24.34■■□□□ 1.49
SNX3-202ENST00000349379 NPTXRO95502 500 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 ITGA4P13612 1032 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 NCKAP1LP55160 1127 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 CAMK1Q14012 370 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 PTPROQ16827 1216 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 CSPP1Q1MSJ5 1256 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 NOMO2Q5JPE7 1267 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 EEF1DP3Q658K8 133 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 SPPL3Q8TCT6 385 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 RNF39Q9H2S5 420 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 NXF3Q9H4D5 531 aaKnown RBP24.33■■□□□ 1.49
SNX3-202ENST00000349379 UBN1Q9NPG3 1134 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 TBC1D13Q9NVG8 400 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 LARSQ9P2J5 1176 aaKnown RBP24.33■■□□□ 1.49
SNX3-202ENST00000349379 PCDHA7Q9UN72 937 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 HES2Q9Y543 173 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 PCDHB12Q9Y5F1 795 aa24.33■■□□□ 1.49
SNX3-202ENST00000349379 BRWD1Q9NSI6 2320 aa24.33■■□□□ 1.48
SNX3-202ENST00000349379 PRUNE2Q8WUY3 3088 aa24.32■■□□□ 1.48
SNX3-202ENST00000349379 SLC16A4O15374 487 aa24.32■■□□□ 1.48
SNX3-202ENST00000349379 AFF1P51825 1210 aaKnown RBP24.32■■□□□ 1.48
SNX3-202ENST00000349379 E2F4Q16254 413 aa24.32■■□□□ 1.48
SNX3-202ENST00000349379 SPOUT1Q5T280 376 aaKnown RBP24.32■■□□□ 1.48
SNX3-202ENST00000349379 TRIM6Q9C030 488 aaPredicted RBP24.32■■□□□ 1.48
SNX3-202ENST00000349379 TNFSF13BQ9Y275 285 aa24.32■■□□□ 1.48
SNX3-202ENST00000349379 GIT1Q9Y2X7 761 aa24.32■■□□□ 1.48
SNX3-202ENST00000349379 PDCD11Q14690 1871 aaKnown RBP24.32■■□□□ 1.48
SNX3-202ENST00000349379 MAPTP10636 758 aaKnown RBP24.31■■□□□ 1.48
SNX3-202ENST00000349379 LIG1P18858 919 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 STAT6P42226 847 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 SMTNP53814 917 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 ATF7IP2Q5U623 682 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 KCNT2Q6UVM3 1135 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 CHAMP1Q96JM3 812 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 FIZ1Q96SL8 496 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 ACO2Q99798 780 aaKnown RBP24.31■■□□□ 1.48
SNX3-202ENST00000349379 PARVGQ9HBI0 331 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 PTPRHQ9HD43 1115 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 ALG13Q9NP73 1137 aaKnown RBP24.31■■□□□ 1.48
SNX3-202ENST00000349379 INPP5FQ9Y2H2 1132 aa24.31■■□□□ 1.48
SNX3-202ENST00000349379 MYMKA6NI61 221 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 FAM13AO94988 1023 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 DNAJB1P25685 340 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 KRT85P78386 507 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 PLCB3Q01970 1234 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 UBE3AQ05086 875 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 CCDC85BQ15834 202 aaPredicted RBP24.3■■□□□ 1.48
SNX3-202ENST00000349379 SV2BQ7L1I2 683 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 HACE1Q8IYU2 909 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 MICALL1Q8N3F8 863 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 LEO1Q8WVC0 666 aaPredicted RBP24.3■■□□□ 1.48
SNX3-202ENST00000349379 ZNF558Q96NG5 402 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 ADPGKQ9BRR6 497 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 MRPL4Q9BYD3 311 aaKnown RBP24.3■■□□□ 1.48
SNX3-202ENST00000349379 PANK2Q9BZ23 570 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 NRDE2Q9H7Z3 1164 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 KANSL3Q9P2N6 904 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 ATP6V1DQ9Y5K8 247 aa24.3■■□□□ 1.48
SNX3-202ENST00000349379 ABLIM1O14639 778 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 B4GALT3O60512 393 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 FGF18O76093 207 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 KRT18P05783 430 aaKnown RBP24.29■■□□□ 1.48
SNX3-202ENST00000349379 PROZP22891 400 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 ME1P48163 572 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 DCAF4L1Q3SXM0 396 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 TIGD5Q53EQ6 642 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 RESP18Q5W5W9 173 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 SLC39A11Q8N1S5 342 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 PDILTQ8N807 584 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 GSTCDQ8NEC7 633 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 URGCPQ8TCY9 931 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 POF1BQ8WVV4 589 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 PPM1EQ8WY54 764 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 DDX12PQ92771 950 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 DNAJC19Q96DA6 116 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 GAD1Q99259 594 aa24.29■■□□□ 1.48
SNX3-202ENST00000349379 ARL5CA6NH57 179 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 H0YCG3 227 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 SCP2P22307 547 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 PPM1AP35813 382 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 PBX3P40426 434 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 MLH1P40692 756 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 BCAR1P56945 870 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 TMEM132AQ24JP5 1023 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 HAUS6Q7Z4H7 955 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms