RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TLE6Q9H808 572 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 ZWILCHQ9H900 591 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 METTL14Q9HCE5 456 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 NMRK1Q9NWW6 199 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 PHF24Q9UPV7 400 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 TRAF3IP3Q9Y228 551 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC4A7Q9Y6M7 1214 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 MYO3BQ8WXR4 1341 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 GTPBP10A4D1E9 387 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 POTEMA6NI47 508 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 EDIL3O43854 480 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 CREB3O43889 395 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 TDP2O95551 362 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 PENKP01210 267 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 SKIP12755 728 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 LRRC41Q15345 812 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 MOXD1Q6UVY6 613 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 TPTE2Q6XPS3 522 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 VSIG1Q86XK7 387 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 GLIS3Q8NEA6 775 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 RFFLQ8WZ73 363 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 NCSTNQ92542 709 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 PTPRN2Q92932 1015 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 ART4Q93070 314 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC7A6OSQ96CW6 309 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 DDX23Q9BUQ8 820 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 PDP2Q9P2J9 529 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 DDX25Q9UHL0 483 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 NARFQ9UHQ1 456 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 PFASO15067 1338 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 SPATA31A1Q5TZJ5 1347 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 DDX3XO00571 662 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC16A3O15427 465 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 TTLL1O95922 423 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 SETSIPP0DME0 302 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 KCNH2Q12809 1159 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 STRN3Q13033 797 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 PABPC1LQ4VXU2 614 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 ARMC3Q5W041 872 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 ARHGEF18Q6ZSZ5 1173 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 CYFIP1Q7L576 1253 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 KCNK18Q7Z418 384 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 LONP2Q86WA8 852 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC44A5Q8NCS7 719 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 PHC3Q8NDX5 983 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 SUPT20HQ8NEM7 779 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 UHMK1Q8TAS1 419 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 UCMAQ8WVF2 138 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 CEP95Q96GE4 821 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 CCDC28BQ9BUN5 200 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 TBC1D10AQ9BXI6 508 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 TAOK3Q9H2K8 898 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 TMEM260Q9NX78 707 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 ARMCX3Q9UH62 379 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 PCDHA12Q9UN75 941 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 STARD13Q9Y3M8 1113 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 USH1CQ9Y6N9 552 aa11.07□□□□□ -0.64
CHRNA1-202ENST00000348749 PDXKO00764 312 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 MAPK13O15264 365 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 HNRNPCL1O60812 293 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 TCEA3O75764 348 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 DCTN3O75935 186 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 GGPS1O95749 300 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 TMEM253P0C7T8 217 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 PLA2G4BP0C869 781 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 VCAM1P19320 739 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 TAC1P20366 129 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 CTNNA2P26232 953 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 TM4SF1P30408 202 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 STX2P32856 288 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 GALCP54803 685 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 JAM2P57087 298 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 ZRSR2Q15696 482 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 HHATQ5VTY9 493 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 TBC1D9BQ66K14 1250 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 DNAAF5Q86Y56 855 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 MAPKAPK5Q8IW41 473 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 SLFN12Q8IYM2 578 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 ANKRD42Q8N9B4 389 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC30A5Q8TAD4 765 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 RBM46Q8TBY0 533 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 LRRC8CQ8TDW0 803 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 SCFD1Q8WVM8 642 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 HAS1Q92839 578 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 GATA6Q92908 595 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 ERP27Q96DN0 273 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 NUDT12Q9BQG2 462 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 UBE2OQ9C0C9 1292 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 VCX3BQ9H321 246 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 DENND2DQ9H6A0 471 aaPredicted RBP11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 VCX3AQ9NNX9 186 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 HDAC9Q9UKV0 1011 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 PPP1R9AQ9ULJ8 1098 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 SYNGAP1Q96PV0 1343 aa11.06□□□□□ -0.64
CHRNA1-202ENST00000348749 AHDC1Q5TGY3 1603 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms