RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 NECAB2Q7Z6G3 386 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 CAGE1Q8TC20 777 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 PTPRHQ9HD43 1115 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 ABLIM1O14639 778 aa29.61■■■□□ 2.33
SSBP4-202ENST00000348495 CETN3O15182 167 aa29.61■■■□□ 2.33
SSBP4-202ENST00000348495 TOM1L1O75674 476 aa29.61■■■□□ 2.33
SSBP4-202ENST00000348495 ATP1A3P13637 1013 aa29.61■■■□□ 2.33
SSBP4-202ENST00000348495 ZNF618Q5T7W0 954 aa29.61■■■□□ 2.33
SSBP4-202ENST00000348495 ARMCX5Q6P1M9 558 aa29.61■■■□□ 2.33
SSBP4-202ENST00000348495 HAPLN2Q9GZV7 340 aa29.61■■■□□ 2.33
SSBP4-202ENST00000348495 TNFSF13BQ9Y275 285 aa29.61■■■□□ 2.33
SSBP4-202ENST00000348495 TLR3O15455 904 aaKnown RBP29.6■■■□□ 2.33
SSBP4-202ENST00000348495 FGFR4P22455 802 aa29.6■■■□□ 2.33
SSBP4-202ENST00000348495 SFPQP23246 707 aaKnown RBP eCLIP29.6■■■□□ 2.33
SSBP4-202ENST00000348495 TLE2Q04725 743 aa29.6■■■□□ 2.33
SSBP4-202ENST00000348495 HSP90AA4PQ58FG1 418 aa29.6■■■□□ 2.33
SSBP4-202ENST00000348495 ATF7IP2Q5U623 682 aa29.6■■■□□ 2.33
SSBP4-202ENST00000348495 SLFN12LQ6IEE8 588 aa29.6■■■□□ 2.33
SSBP4-202ENST00000348495 FILIP1Q7Z7B0 1213 aa29.6■■■□□ 2.33
SSBP4-202ENST00000348495 ZBTB45Q96K62 511 aaPredicted RBP29.6■■■□□ 2.33
SSBP4-202ENST00000348495 HSPBP1Q9NZL4 362 aa29.6■■■□□ 2.33
SSBP4-202ENST00000348495 NOC2LQ9Y3T9 749 aaKnown RBP29.6■■■□□ 2.33
SSBP4-202ENST00000348495 A0A0B4J269 797 aa29.59■■■□□ 2.33
SSBP4-202ENST00000348495 ERLIN2O94905 339 aa29.59■■■□□ 2.33
SSBP4-202ENST00000348495 ARF4P18085 180 aaPredicted RBP29.59■■■□□ 2.33
SSBP4-202ENST00000348495 EN2P19622 333 aaPredicted RBP29.59■■■□□ 2.33
SSBP4-202ENST00000348495 HOXA11P31270 313 aaPredicted RBP29.59■■■□□ 2.33
SSBP4-202ENST00000348495 FAAP100Q0VG06 881 aa29.59■■■□□ 2.33
SSBP4-202ENST00000348495 CATSPER4Q7RTX7 472 aa29.59■■■□□ 2.33
SSBP4-202ENST00000348495 FAM228AQ86W67 206 aa29.59■■■□□ 2.33
SSBP4-202ENST00000348495 POMGNT1Q8WZA1 660 aa29.59■■■□□ 2.33
SSBP4-202ENST00000348495 PCIF1Q9H4Z3 704 aa29.59■■■□□ 2.33
SSBP4-202ENST00000348495 DCDC2CA8MYV0 355 aa29.58■■■□□ 2.33
SSBP4-202ENST00000348495 AKAP3O75969 853 aa29.58■■■□□ 2.33
SSBP4-202ENST00000348495 CASP4P49662 377 aa29.58■■■□□ 2.33
SSBP4-202ENST00000348495 CYP2J2P51589 502 aa29.58■■■□□ 2.33
SSBP4-202ENST00000348495 FBXO47Q5MNV8 452 aa29.58■■■□□ 2.33
SSBP4-202ENST00000348495 CCDC155Q8N6L0 562 aa29.58■■■□□ 2.33
SSBP4-202ENST00000348495 AGPAT5Q9NUQ2 364 aa29.58■■■□□ 2.33
SSBP4-202ENST00000348495 SQORQ9Y6N5 450 aa29.58■■■□□ 2.33
SSBP4-202ENST00000348495 A0A1B0GUA9 196 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 SLC16A3O15427 465 aaKnown RBP29.57■■■□□ 2.32
SSBP4-202ENST00000348495 MRE11P49959 708 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 MCL1Q07820 350 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 BFSP2Q13515 415 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 LRRC26Q2I0M4 334 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 TCP11X2Q5H9J9 407 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 EEF1DP3Q658K8 133 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 MPZL3Q6UWV2 235 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 FAM114A1Q8IWE2 563 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 XXYLT1Q8NBI6 393 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 CNOT6LQ96LI5 555 aaKnown RBP29.57■■■□□ 2.32
SSBP4-202ENST00000348495 FBXL18Q96ME1 805 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 MKNK1Q9BUB5 465 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 OSBPL7Q9BZF2 842 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 PDZD7Q9H5P4 517 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 ANKFY1Q9P2R3 1169 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 KCNJ18B7U540 433 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 PITPNM1O00562 1244 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 KIAA0391O15091 583 aaKnown RBP29.57■■■□□ 2.32
SSBP4-202ENST00000348495 GNA14O95837 355 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 EEF1GP26641 437 aaKnown RBP29.57■■■□□ 2.32
SSBP4-202ENST00000348495 MARSP56192 900 aaKnown RBP29.57■■■□□ 2.32
SSBP4-202ENST00000348495 KCNJ12Q14500 433 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 ZSWIM2Q8NEG5 633 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 CPB2Q96IY4 423 aa29.57■■■□□ 2.32
SSBP4-202ENST00000348495 CLDN3O15551 220 aa29.56■■■□□ 2.32
SSBP4-202ENST00000348495 EXOC3O60645 756 aa29.56■■■□□ 2.32
SSBP4-202ENST00000348495 SPAG1Q07617 926 aa29.56■■■□□ 2.32
SSBP4-202ENST00000348495 APTXQ7Z2E3 356 aaKnown RBP29.56■■■□□ 2.32
SSBP4-202ENST00000348495 AP5Z1O43299 807 aa29.55■■■□□ 2.32
SSBP4-202ENST00000348495 RPS6KA5O75582 802 aa29.55■■■□□ 2.32
SSBP4-202ENST00000348495 SELPP16109 830 aa29.55■■■□□ 2.32
SSBP4-202ENST00000348495 AXLP30530 894 aa29.55■■■□□ 2.32
SSBP4-202ENST00000348495 LPIN1Q14693 890 aa29.55■■■□□ 2.32
SSBP4-202ENST00000348495 MBTPS1Q14703 1052 aa29.55■■■□□ 2.32
SSBP4-202ENST00000348495 CEP135Q66GS9 1140 aa29.55■■■□□ 2.32
SSBP4-202ENST00000348495 BORCS6Q96GS4 357 aa29.55■■■□□ 2.32
SSBP4-202ENST00000348495 NOC4LQ9BVI4 516 aaKnown RBP29.55■■■□□ 2.32
SSBP4-202ENST00000348495 AGO3Q9H9G7 860 aaKnown RBP29.55■■■□□ 2.32
SSBP4-202ENST00000348495 LIMA1Q9UHB6 759 aaKnown RBP29.55■■■□□ 2.32
SSBP4-202ENST00000348495 LRRC10BA6NIK2 292 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 FAM189A1O60320 539 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 CDK11BP21127 795 aaKnown RBP29.54■■■□□ 2.32
SSBP4-202ENST00000348495 PSMC2P35998 433 aaKnown RBP29.54■■■□□ 2.32
SSBP4-202ENST00000348495 NCBP1Q09161 790 aaKnown RBP29.54■■■□□ 2.32
SSBP4-202ENST00000348495 SARM1Q6SZW1 724 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 LRRC8DQ7L1W4 858 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 CDR2LQ86X02 465 aaPredicted RBP29.54■■■□□ 2.32
SSBP4-202ENST00000348495 USP38Q8NB14 1042 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 SAAL1Q96ER3 474 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 MSTO1Q9BUK6 570 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 MAGEC2Q9UBF1 373 aaPredicted RBP29.54■■■□□ 2.32
SSBP4-202ENST00000348495 AGO2Q9UKV8 859 aaKnown RBP29.54■■■□□ 2.32
SSBP4-202ENST00000348495 TBX21Q9UL17 535 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 ATP11BQ9Y2G3 1177 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 FRMD4BQ9Y2L6 1034 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 RBAK-RBAKDNI3L0D1 243 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 MAPK13O15264 365 aa29.54■■■□□ 2.32
SSBP4-202ENST00000348495 NOLC1Q14978 699 aaKnown RBP eCLIP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms