RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 GANQ9H2C0 597 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 TRMT1Q9NXH9 659 aaKnown RBP20.31■□□□□ 0.84
PTN-201ENST00000348225 RNF186Q9NXI6 227 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 PLAGL2Q9UPG8 496 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 DAAM1Q9Y4D1 1078 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 KPNA6O60684 536 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 TRPA1O75762 1119 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 SLC9A1P19634 815 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 PSEN2P49810 448 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 CYP24A1Q07973 514 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 CBWD6Q4V339 395 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 CBWD3Q5JTY5 395 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 DNTTIP2Q5QJE6 756 aaKnown RBP20.31■□□□□ 0.84
PTN-201ENST00000348225 CBWD5Q5RIA9 395 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 RAD9BQ6WBX8 426 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 KAT2BQ92831 832 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 ZBTB10Q96DT7 871 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 PPP1R13BQ96KQ4 1090 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 ANKFY1Q9P2R3 1169 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 FBXL5Q9UKA1 691 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 GOLGA6L9A6NEM1 432 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 LRRC53A6NM62 1247 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 USP27XA6NNY8 438 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 INO80B-WBP1J3KQ70 363 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 PMM2O15305 246 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 TOM1L1O75674 476 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 GJB1P08034 283 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 CCDC175P0C221 793 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 SMIM10L2AP0DMW4 78 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 SMIM10L2BP0DMW5 78 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 DLG4P78352 724 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 KLHDC7AQ5VTJ3 777 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 WDR59Q6PJI9 974 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 TOGARAM2Q6ZUX3 1019 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 SYN2Q92777 582 aaPredicted RBP20.3■□□□□ 0.84
PTN-201ENST00000348225 MSTO1Q9BUK6 570 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 INO80BQ9C086 356 aaPredicted RBP20.3■□□□□ 0.84
PTN-201ENST00000348225 SPC25Q9HBM1 224 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 NLRC4Q9NPP4 1024 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 PRMT7Q9NVM4 692 aaPredicted RBP20.3■□□□□ 0.84
PTN-201ENST00000348225 PPP2R2CQ9Y2T4 447 aa20.3■□□□□ 0.84
PTN-201ENST00000348225 A0A0B4J269 797 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 HAS3O00219 553 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 ACKR2O00590 384 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 CLDN3O15551 220 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 SEPT4O43236 478 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 ZEB2O60315 1214 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 UCHL3P15374 230 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 GTF2H1P32780 548 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 VEGFBP49765 207 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 MXI1P50539 228 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 GJA9P57773 515 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 CHMP4BP1P59074 171 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 MTF1Q14872 753 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 MARCH8Q5T0T0 291 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 NFRKBQ6P4R8 1299 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 TRIM65Q6PJ69 517 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
PTN-201ENST00000348225 IFNLR1Q8IU57 520 aaPredicted RBP20.29■□□□□ 0.84
PTN-201ENST00000348225 PARD3BQ8TEW8 1205 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 LMBR1Q8WVP7 490 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 FZD8Q9H461 694 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 SETD4Q9NVD3 440 aa20.29■□□□□ 0.84
PTN-201ENST00000348225 EDN1P05305 212 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 ACTN1P12814 892 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 CYLC1P35663 651 aaPredicted RBP20.28■□□□□ 0.84
PTN-201ENST00000348225 CDC42EP1Q00587 391 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 BEX3Q00994 111 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 MBTD1Q05BQ5 628 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 PPP3CAQ08209 521 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 PRPF4BQ13523 1007 aaKnown RBP20.28■□□□□ 0.84
PTN-201ENST00000348225 SFMBT2Q5VUG0 894 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 CCDC170Q8IYT3 715 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 PLEKHO2Q8TD55 490 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 CCDC127Q96BQ5 260 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 CHP1Q99653 195 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 ACO2Q99798 780 aaKnown RBP20.28■□□□□ 0.84
PTN-201ENST00000348225 INTS2Q9H0H0 1204 aaKnown RBP20.28■□□□□ 0.84
PTN-201ENST00000348225 SRRDQ9UH36 339 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 MYO6Q9UM54 1294 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 USP20Q9Y2K6 914 aa20.28■□□□□ 0.84
PTN-201ENST00000348225 GNRH1P01148 92 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 C6orf222P0C671 652 aaPredicted RBP20.27■□□□□ 0.84
PTN-201ENST00000348225 RARBP10826 455 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 RFX1P22670 979 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 GCLMP48507 274 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 PTPN14Q15678 1187 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 TMEM132AQ24JP5 1023 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 C1orf220Q5T0J3 134 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 DPY19L2P1Q6NXN4 242 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 TSHZ1Q6ZSZ6 1077 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 ZNF410Q86VK4 478 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 CD99L2Q8TCZ2 262 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 ZBTB45Q96K62 511 aaPredicted RBP20.27■□□□□ 0.84
PTN-201ENST00000348225 C16orf45Q96MC5 204 aaPredicted RBP20.27■□□□□ 0.84
PTN-201ENST00000348225 SPAG5Q96R06 1193 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 TCHPQ9BT92 498 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 UPF3AQ9H1J1 476 aaKnown RBP20.27■□□□□ 0.84
PTN-201ENST00000348225 TMEM8AQ9HCN3 771 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 SIX2Q9NPC8 291 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms