RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 IRF2BP1Q8IU81 584 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 ZNF710Q8N1W2 664 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 TANC1Q9C0D5 1861 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 PCDH10Q9P2E7 1040 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 CNTNAP2Q9UHC6 1331 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 FSD2A1L4K1 749 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 SMTNL1A8MU46 457 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 GHRP10912 638 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 HOXA11P31270 313 aaPredicted RBP20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 CASP4P49662 377 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 CYP2J2P51589 502 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 LPIN1Q14693 890 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 GPNMBQ14956 572 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 NFIL3Q16649 462 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 EDRF1Q3B7T1 1238 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 ZPBP2Q6X784 338 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 TSHZ1Q6ZSZ6 1077 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 HS2ST1Q7LGA3 356 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 CSGALNACT2Q8N6G5 542 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 CAGE1Q8TC20 777 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 PTPRHQ9HD43 1115 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 TBX21Q9UL17 535 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 STYXL1Q9Y6J8 313 aa20.8■□□□□ 0.92
CHMP4A-201ENST00000347519 BECN2A8MW95 431 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 SELPP16109 830 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 PROZP22891 400 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 NR2F2P24468 414 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 ATF7IP2Q5U623 682 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 LRRC8DQ7L1W4 858 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 ZBTB33Q86T24 672 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 C12orf56Q8IXR9 622 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 PRIMPOLQ96LW4 560 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 PDZD7Q9H5P4 517 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 ERVK-5Q9HDB9 667 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 ST3GAL5Q9UNP4 418 aa20.79■□□□□ 0.92
CHMP4A-201ENST00000347519 GOLGA8IPA6NC78 632 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 GOLGA8JA6NMD2 632 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 RPS6KA5O75582 802 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 ERLIN2O94905 339 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 ZNF18P17022 549 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 CD52P31358 61 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 FKBP3Q00688 224 aaKnown RBP20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 ADAM9Q13443 819 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 BFSP2Q13515 415 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 TPD52L1Q16890 204 aaPredicted RBP20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 CDKAL1Q5VV42 579 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 ARMCX5Q6P1M9 558 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 SLC9A9Q8IVB4 645 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 GOLGA5Q8TBA6 731 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 SAAL1Q96ER3 474 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 PPP1R12CQ9BZL4 782 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 WNT8AQ9H1J5 351 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 AGPAT5Q9NUQ2 364 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 HSPBP1Q9NZL4 362 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 ANKFY1Q9P2R3 1169 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 TNFSF13BQ9Y275 285 aa20.78■□□□□ 0.92
CHMP4A-201ENST00000347519 A0A0B4J269 797 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 TOM1L1O75674 476 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 CLTBP09497 229 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 HARSP12081 509 aaKnown RBP20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 ATP1A3P13637 1013 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 GARTP22102 1010 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 SFPQP23246 707 aaKnown RBP eCLIP20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 CYP2C18P33260 490 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 SNRPFP62306 86 aaKnown RBP20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 GSE1Q14687 1217 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 ZBTB41Q5SVQ8 909 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 CCDC155Q8N6L0 562 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 POMGNT1Q8WZA1 660 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 CDT1Q9H211 546 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 HIPK3Q9H422 1215 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 TMEM39AQ9NV64 488 aa20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 CGNQ9P2M7 1197 aaKnown RBP20.77■□□□□ 0.92
CHMP4A-201ENST00000347519 A0A1B0GUA9 196 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 TRIM43BA6NCK2 446 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 PITPNM1O00562 1244 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 AP5Z1O43299 807 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 NBNO60934 754 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 AKAP3O75969 853 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 CCL23P55773 120 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 NFX1Q12986 1120 aaKnown RBP20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 TMEM132AQ24JP5 1023 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 SEZ6Q53EL9 994 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 CEP135Q66GS9 1140 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 MPZL3Q6UWV2 235 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 TMEM174Q8WUU8 243 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 TRIM43Q96BQ3 446 aaPredicted RBP20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 SCLYQ96I15 445 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 CEP63Q96MT8 703 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 TMX1Q9H3N1 280 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 THAP9Q9H5L6 903 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 PADI3Q9ULW8 664 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 TET1Q8NFU7 2136 aa20.76■□□□□ 0.91
CHMP4A-201ENST00000347519 GOLGA6L19H0YKK7 550 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 CETN3O15182 167 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 FAM189A1O60320 539 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 ADRB2P07550 413 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 ITGB8P26012 769 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 MATR3P43243 847 aaKnown RBP eCLIP20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 MCL1Q07820 350 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms