RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 LAMC3Q9Y6N6 1575 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 PDS5AQ29RF7 1337 aaKnown RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 E9PMD0 336 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 UBXN2AP68543 259 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 RASGRF1Q13972 1273 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 R3HDM1Q15032 1099 aaKnown RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 SLFN13Q68D06 897 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 ZBTB8OSQ8IWT0 167 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 C11orf70Q9BRQ4 267 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 C2CD2Q9Y426 696 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 ZNF608Q9ULD9 1512 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 KCNMA1Q12791 1236 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 PASD1Q8IV76 773 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 CAPN6Q9Y6Q1 641 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 SLC16A2P36021 539 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 BTDP43251 543 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 ARHGDIAP52565 204 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 P3H1Q32P28 736 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 KLC3Q6P597 504 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 NLRP9Q7RTR0 991 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 KLHL25Q9H0H3 589 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 LRCH1Q9Y2L9 728 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 MRPL11Q9Y3B7 192 aaKnown RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 CLDN3O15551 220 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 ENO3P13929 434 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 USP11P51784 963 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 HABP4Q5JVS0 413 aaKnown RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 EPHA10Q5JZY3 1008 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 CDR2LQ86X02 465 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 ERICH1Q86X53 443 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 RYBPQ8N488 228 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 RBBP8NLQ8NC74 664 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 ALKBH8Q96BT7 664 aaKnown RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 RXFP1Q9HBX9 757 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 ANGPTL3Q9Y5C1 460 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 AKAP10O43572 662 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 SORBS3O60504 671 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 TAC1P20366 129 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 YWHAHQ04917 246 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 RHOT1Q8IXI2 618 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 CHURC1Q8WUH1 139 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 CYGBQ8WWM9 190 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 SERPINB12Q96P63 405 aa12.82□□□□□ -0.36
COL12A1-202ENST00000345356 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
COL12A1-202ENST00000345356 ASAP2O43150 1006 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 AHCYL1O43865 530 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 CLPTM1O96005 669 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 PLEKP08567 350 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 MCAMP43121 646 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 STX3Q13277 289 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 KCTD1Q719H9 257 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 EXT2Q93063 718 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 MED10Q9BTT4 135 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 MANSC1Q9H8J5 431 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 PFDN6O15212 129 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 PHKG2P15735 406 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 PECAM1P16284 738 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 POLGP54098 1239 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 OVGP1Q12889 678 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 OR6B2Q6IFH4 312 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 ZNF280CQ8ND82 737 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 BEGAINQ9BUH8 593 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 KLHL2O95198 593 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 PRLRP16471 622 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 CTTNQ14247 550 aaKnown RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 MFSD14BQ5SR56 506 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 THEMIS2Q5TEJ8 643 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 CCDC117Q8IWD4 279 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 TMA16Q96EY4 203 aaKnown RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 KLF6Q99612 283 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-202ENST00000345356 CNGB3Q9NQW8 809 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 USP17L3A6NCW0 530 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 USP17L4A6NCW7 530 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 CHEK2O96017 543 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 USP17L1Q7RTZ2 530 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 GLG1Q92896 1179 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 PPP1R36Q96LQ0 422 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 MAGEB18Q96M61 343 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 TRIM9Q9C026 710 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 HEY2Q9UBP5 337 aa12.81□□□□□ -0.36
COL12A1-202ENST00000345356 MED7O43513 233 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 GLI1P08151 1106 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 FDPSP14324 419 aaKnown RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 RCAN1P53805 252 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 TRAF7Q6Q0C0 670 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 EXOC8Q8IYI6 725 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 ZC3H15Q8WU90 426 aaKnown RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 DNAJC7Q99615 494 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 WDR11Q9BZH6 1224 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms