RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 A0A0U1RQJ8 604 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 CTAGE9A4FU28 777 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 CYP24A1Q07973 514 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 PPP3CAQ08209 521 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 MORN1Q5T089 497 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 C10orf76Q5T2E6 689 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 CDCA2Q69YH5 1023 aaPredicted RBP27.41■■□□□ 1.98
TRADD-201ENST00000345057 KRT39Q6A163 491 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 IFNL1Q8IU54 200 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 ATRIPQ8WXE1 791 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 TMEM8AQ9HCN3 771 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 DNAJC12Q9UKB3 198 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 PASKQ96RG2 1323 aa27.41■■□□□ 1.98
TRADD-201ENST00000345057 MAGEB2O15479 319 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 MAGEA1P43355 309 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 GCLMP48507 274 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 CYP27A1Q02318 531 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 SLC18A3Q16572 532 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 EPC2Q52LR7 807 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 IRF2BP2Q7Z5L9 587 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 IRX2Q9BZI1 471 aaPredicted RBP27.4■■□□□ 1.98
TRADD-201ENST00000345057 ZFYVE28Q9HCC9 887 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 HOXC6P09630 235 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 LAMTOR4Q0VGL1 99 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 C1orf220Q5T0J3 134 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 TMEM63BQ5T3F8 832 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 AFG1LQ8WV93 481 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 SUCLA2Q9P2R7 463 aaPredicted RBP27.4■■□□□ 1.98
TRADD-201ENST00000345057 AGO2Q9UKV8 859 aaKnown RBP27.4■■□□□ 1.98
TRADD-201ENST00000345057 ZHX1Q9UKY1 873 aaPredicted RBP27.4■■□□□ 1.98
TRADD-201ENST00000345057 TLL2Q9Y6L7 1015 aa27.4■■□□□ 1.98
TRADD-201ENST00000345057 ZNF263O14978 683 aa27.39■■□□□ 1.98
TRADD-201ENST00000345057 GFPT2O94808 682 aa27.39■■□□□ 1.98
TRADD-201ENST00000345057 ARID5AQ03989 594 aa27.39■■□□□ 1.98
TRADD-201ENST00000345057 ZSWIM2Q8NEG5 633 aa27.39■■□□□ 1.98
TRADD-201ENST00000345057 LMO3Q8TAP4 145 aa27.39■■□□□ 1.98
TRADD-201ENST00000345057 NPLOC4Q8TAT6 608 aa27.39■■□□□ 1.98
TRADD-201ENST00000345057 ERO1AQ96HE7 468 aa27.39■■□□□ 1.98
TRADD-201ENST00000345057 NAPGQ99747 312 aaPredicted RBP27.39■■□□□ 1.98
TRADD-201ENST00000345057 MRPL4Q9BYD3 311 aaKnown RBP27.39■■□□□ 1.98
TRADD-201ENST00000345057 TMEM117Q9H0C3 514 aa27.39■■□□□ 1.98
TRADD-201ENST00000345057 PJA2O43164 708 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 TOMM70O94826 608 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 SOX5P35711 763 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 C17orf99Q6UX52 265 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 SLC35F6Q8N357 371 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 PLEKHO2Q8TD55 490 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 CCDC127Q96BQ5 260 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 FAM213AQ9BRX8 229 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 COQ4Q9Y3A0 265 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 LRRIQ3A6PVS8 624 aaPredicted RBP27.38■■□□□ 1.97
TRADD-201ENST00000345057 F8VZ95 297 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 FANCGO15287 622 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 HOXD8P13378 290 aaPredicted RBP27.38■■□□□ 1.97
TRADD-201ENST00000345057 GFPT1Q06210 699 aaPredicted RBP27.38■■□□□ 1.97
TRADD-201ENST00000345057 MAPK6Q16659 721 aa27.38■■□□□ 1.97
TRADD-201ENST00000345057 SECISBP2LQ93073 1101 aaKnown RBP27.38■■□□□ 1.97
TRADD-201ENST00000345057 EFCAB12Q6NXP0 572 aa27.37■■□□□ 1.97
TRADD-201ENST00000345057 LRRC71Q8N4P6 559 aa27.37■■□□□ 1.97
TRADD-201ENST00000345057 RNF149Q8NC42 400 aa27.37■■□□□ 1.97
TRADD-201ENST00000345057 OR6J1Q8NGC5 347 aa27.37■■□□□ 1.97
TRADD-201ENST00000345057 SOCS4Q8WXH5 440 aa27.37■■□□□ 1.97
TRADD-201ENST00000345057 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.37■■□□□ 1.97
TRADD-201ENST00000345057 SMPD1P17405 629 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 MATR3P43243 847 aaKnown RBP eCLIP27.36■■□□□ 1.97
TRADD-201ENST00000345057 MKRN4PQ13434 485 aaPredicted RBP27.36■■□□□ 1.97
TRADD-201ENST00000345057 DRP2Q13474 957 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 DRAP1Q14919 205 aaPredicted RBP27.36■■□□□ 1.97
TRADD-201ENST00000345057 PSMD6Q15008 389 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 DGKDQ16760 1214 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 GJC2Q5T442 439 aaPredicted RBP27.36■■□□□ 1.97
TRADD-201ENST00000345057 FAM81BQ96LP2 452 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 FNBP1Q96RU3 617 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 MSTO1Q9BUK6 570 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 TARS2Q9BW92 718 aaKnown RBP27.36■■□□□ 1.97
TRADD-201ENST00000345057 CCDC113Q9H0I3 377 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 RNPEPQ9H4A4 650 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 ATP8B3O60423 1300 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 INSRRP14616 1297 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 PTK2Q05397 1052 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 POU5F1BQ06416 359 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 GJB7Q6PEY0 223 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 RHPN2Q8IUC4 686 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 FBXL13Q8NEE6 735 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 NFKBIZQ9BYH8 718 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 LACRTQ9GZZ8 138 aa27.36■■□□□ 1.97
TRADD-201ENST00000345057 A0A0B4J269 797 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.35■■□□□ 1.97
TRADD-201ENST00000345057 TOM1L1O75674 476 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 C22orf31O95567 290 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 SRGAP2CP0DJJ0 459 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 TMOD1P28289 359 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 GPC3P51654 580 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 CLDN10P78369 228 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 TNFAIP2Q03169 654 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 PHLDB3Q6NSJ2 640 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 METTL13Q8N6R0 699 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 TRIM58Q8NG06 486 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 TRIM10Q9UDY6 481 aa27.35■■□□□ 1.97
TRADD-201ENST00000345057 MRFAP1Q9Y605 127 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms