RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 AOX1Q06278 1338 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 PRR23D1E9PI22 279 aaPredicted RBP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 PRR23D2P0DMB1 279 aaPredicted RBP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 SLC8A1P32418 973 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 ETFBP38117 255 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 GMPSP49915 693 aaPredicted RBP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 SLFN12LQ6IEE8 588 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 ACAD11Q709F0 780 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 ZC3H18Q86VM9 953 aaKnown RBP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 HASPINQ8TF76 798 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 SH3BP1Q9Y3L3 701 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 E9PMD0 336 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 PQBP1O60828 265 aaKnown RBP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 OCA2Q04671 838 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 ARMC2Q8NEN0 867 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 GRIN1Q05586 938 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 CCDC142Q17RM4 750 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 DEPDC1Q5TB30 811 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 IQCDQ96DY2 449 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 PGRMC1O00264 195 aaKnown RBP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 HOXB7P09629 217 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 KRT17Q04695 432 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 SGO1Q5FBB7 561 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 LRRC8EQ6NSJ5 796 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 ARHGEF25Q86VW2 580 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 PPP1R13BQ96KQ4 1090 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 KDM4CQ9H3R0 1056 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 CYP4F11Q9HBI6 524 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 ADRA2BP18089 450 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 CHRNA3P32297 505 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 SOAT1P35610 550 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 MRPL28Q13084 256 aaKnown RBP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 APOA5Q6Q788 366 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 OR9Q1Q8NGQ5 310 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 ZNF512Q96ME7 567 aaPredicted RBP12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 TRIM54Q9BYV2 358 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 ADGBQ8N7X0 1667 aa12.98□□□□□ -0.33
TRIOBP-202ENST00000344404 hCG_2014768A0A024R1R8 64 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 C5orf58C9J3I9 102 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 COPEO14579 308 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ADCY3O60266 1144 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 THPOP40225 353 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 RGS7P49802 495 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 TNFAIP2Q03169 654 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 MORF4L2Q15014 288 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 GIMAP4Q9NUV9 329 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ANGPTL2Q9UKU9 493 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ZNF211Q13398 564 aaPredicted RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 AMHR2Q16671 573 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 FAM102AQ5T9C2 384 aaPredicted RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 BZW1Q7L1Q6 419 aaKnown RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 TRIM48Q8IWZ4 208 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 GIMAP8Q8ND71 665 aaPredicted RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ARL8AQ96BM9 186 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 C11orf70Q9BRQ4 267 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 USE1Q9NZ43 259 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 PNMA8BQ9ULN7 279 aaPredicted RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 DPCR1Q3MIW9 517 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 RPAINQ86UA6 219 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 PALMDQ9NP74 551 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 GJB4Q9NTQ9 266 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ASNSD1Q9NWL6 643 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 H0Y3Z8 333 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 LMNAP02545 664 aaKnown RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 SULT1E1P49888 294 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 FKBP3Q00688 224 aaKnown RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 TWF1Q12792 350 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ALKBH2Q6NS38 261 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ALG13Q9NP73 1137 aaKnown RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 TADA3O75528 432 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 GNA15P30679 374 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 CNOT8Q9UFF9 292 aaKnown RBP12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 MYO1GB0I1T2 1018 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 GSNP06396 782 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 FCGRTP55899 365 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 TRIM60Q495X7 471 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 ADGRF4Q8IZF3 695 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 NUP160Q12769 1436 aa12.97□□□□□ -0.33
TRIOBP-202ENST00000344404 RNF103-CHMP3A0A140T963 221 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 TLR2O60603 784 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 SERPING1P05155 500 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 PBLDP30039 288 aaPredicted RBP12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 RAD51Q06609 339 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 TSC22D1Q15714 1073 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 VN1R5Q7Z5H4 357 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 PDIK1LQ8N165 341 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 NUP93Q8N1F7 819 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 PPM1NQ8N819 430 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 FAM161BQ96MY7 647 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 DCTN4Q9UJW0 460 aa12.96□□□□□ -0.33
TRIOBP-202ENST00000344404 MAPK9P45984 424 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms