RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 FAM114A1Q8IWE2 563 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 PRSS33Q8NF86 280 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 RDM1Q8NG50 284 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 LMBR1Q8WVP7 490 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 EDAQ92838 391 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 CDHR1Q96JP9 859 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 NAP1L5Q96NT1 182 aaPredicted RBP14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 PLVAPQ9BX97 442 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 KCNF1Q9H3M0 494 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 SLC39A2Q9NP94 309 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 KCND2Q9NZV8 630 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 CD207Q9UJ71 328 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 MAPK8IP1Q9UQF2 711 aa14.84□□□□□ -0.03
HERPUD1-202ENST00000344114 TRIOO75962 3097 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 TRIM49BA6NDI0 452 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 SPATA31C2B4DYI2 1134 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 KCNJ18B7U540 433 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 LINC01565O15544 149 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 SLITRK3O94933 977 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 EEF1GP26641 437 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 SFNP31947 248 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 CLCN1P35523 988 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 JAK3P52333 1124 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 KRT76Q01546 638 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 LRRC63Q05C16 580 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 ITGB3BPQ13352 177 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 CAMK1Q14012 370 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 CTTNQ14247 550 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 KCNJ12Q14500 433 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 HSP90AA4PQ58FG1 418 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 CENPPQ6IPU0 288 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 CYFIP1Q7L576 1253 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 APTXQ7Z2E3 356 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 FILIP1Q7Z7B0 1213 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 TRIM50Q86XT4 487 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 MSLNLQ96KJ4 702 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 SNX27Q96L92 541 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 NACC1Q96RE7 527 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 PHOX2BQ99453 314 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 INTS13Q9NVM9 706 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 RGL1Q9NZL6 768 aa14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 ZNF215Q9UL58 517 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-202ENST00000344114 NRCAMQ92823 1304 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 ENPP3O14638 875 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 FGFR1OPO95684 399 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 P4HBP07237 508 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 GHRP10912 638 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 LPIN1Q14693 890 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 NR1I3Q14994 352 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 ARSHQ5FYA8 562 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 TCP11X2Q5H9J9 407 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 TPH2Q8IWU9 490 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 ZNF830Q96NB3 372 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 TSG101Q99816 390 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 LXNQ9BS40 222 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 BHMT2Q9H2M3 363 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 PLXNA4Q9HCM2 1894 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 MAGEC2Q9UBF1 373 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 TELO2Q9Y4R8 837 aa14.82□□□□□ -0.04
HERPUD1-202ENST00000344114 NFASCO94856 1347 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 LRRC10BA6NIK2 292 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 WDR64B1ANS9 1081 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 DDX39AO00148 427 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 NRDCO43847 1150 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 TBCAO75347 108 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 DGKIO75912 1065 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 LYPLA2O95372 231 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 GAP43P17677 238 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 PMS1P54277 932 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 GIT2Q14161 759 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 BTG3Q14201 252 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 KRT31Q15323 416 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 ZNF746Q6NUN9 644 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 TAF2Q6P1X5 1199 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 RUFY4Q6ZNE9 571 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 LRRC8AQ8IWT6 810 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 CSGALNACT2Q8N6G5 542 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 DUSP9Q99956 384 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 SENP7Q9BQF6 1050 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 REEP2Q9BRK0 252 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 IGFLR1Q9H665 355 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 RTN4Q9NQC3 1192 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 PCDHA2Q9Y5H9 948 aa14.81□□□□□ -0.04
HERPUD1-202ENST00000344114 SFPQP23246 707 aaKnown RBP eCLIP14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 COPB1P53618 953 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 PTPN5P54829 565 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 CBX2Q14781 532 aaPredicted RBP14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 UTP14CQ5TAP6 766 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 RINT1Q6NUQ1 792 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 TRIM67Q6ZTA4 783 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 CRIPAKQ8N1N5 446 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 SMRP1Q8NCR6 262 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 CACTINQ8WUQ7 758 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 HPS3Q969F9 1004 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 PRRX2Q99811 253 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 SRRTQ9BXP5 876 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 ZSWIM4Q9H7M6 989 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 ALG13Q9NP73 1137 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms