RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 SIX5Q8N196 739 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 UBR7Q8N806 425 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 SMC6Q96SB8 1091 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 EIF2AQ9BY44 585 aaKnown RBP9.41□□□□□ -0.9
SP140-201ENST00000343805 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 TRIM9Q9C026 710 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 ZHX3Q9H4I2 956 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 NHEJ1Q9H9Q4 299 aaPredicted RBP9.41□□□□□ -0.9
SP140-201ENST00000343805 R3HDM2Q9Y2K5 976 aaKnown RBP9.41□□□□□ -0.9
SP140-201ENST00000343805 ITIH6Q6UXX5 1313 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 NDUFB5O43674 189 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 TDP2O95551 362 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 WEE1P30291 646 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 TM4SF1P30408 202 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 SLC16A2P36021 539 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 CD97P48960 835 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 PMS2P54278 862 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 SKOR1P84550 965 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 PPARDQ03181 441 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 MYO1EQ12965 1108 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
SP140-201ENST00000343805 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
SP140-201ENST00000343805 CFAP157Q5JU67 520 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 SYT2Q8N9I0 419 aaPredicted RBP9.41□□□□□ -0.9
SP140-201ENST00000343805 ADAM32Q8TC27 787 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 HELQQ8TDG4 1101 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 NDNQ99608 321 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 POLD4Q9HCU8 107 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 SAR1BQ9Y6B6 198 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 LRP5O75197 1615 aa9.41□□□□□ -0.9
SP140-201ENST00000343805 SPATA31A5Q5VU36 1347 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 SPATA31A7Q8IWB4 1347 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 ANP32DO95626 131 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 ATP6V1G2O95670 118 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 CDK17Q00537 523 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 KIF5AQ12840 1032 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 UBE2SQ16763 222 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 SH2D4BQ5SQS7 431 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 MFSD14BQ5SR56 506 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 TMEM53Q6P2H8 277 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 GIMAP8Q8ND71 665 aaPredicted RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 WDR66Q8TBY9 1149 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 SH3TC2Q8TF17 1288 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 P2RX5Q93086 422 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 RRP36Q96EU6 259 aaKnown RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 CCDC42Q96M95 316 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 PYM1Q9BRP8 204 aaKnown RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 C2orf49Q9BVC5 232 aaPredicted RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 RBCK1Q9BYM8 510 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 NOD2Q9HC29 1040 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 C6orf50Q9HD87 102 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 NLRC4Q9NPP4 1024 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 KBTBD4Q9NVX7 518 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 EHD2Q9NZN4 543 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 LRWD1Q9UFC0 647 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 CCDC162PA2VCL2 907 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 OPLAHO14841 1288 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 EPHB6O15197 1021 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 TBCAO75347 108 aaKnown RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 LDHAP00338 332 aaKnown RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 HSPA8P11142 646 aaKnown RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 SCTRP47872 440 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 DNM2P50570 870 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 TUBA1BP68363 451 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 MRPS35P82673 323 aaKnown RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 C2orf54Q08AI8 447 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 BOLA3Q53S33 107 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 SLC10A5Q5PT55 438 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 POTEEQ6S8J3 1075 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 TUBA1AQ71U36 451 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 NEK8Q86SG6 692 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 ESX1Q8N693 406 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 GDAP1Q8TB36 358 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 EMID1Q96A84 441 aaPredicted RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 STAMBPL1Q96FJ0 436 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 CALML4Q96GE6 196 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 MXD3Q9BW11 206 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 SNTG2Q9NY99 539 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 NOP53Q9NZM5 478 aaKnown RBP9.4□□□□□ -0.9
SP140-201ENST00000343805 SLC4A7Q9Y6M7 1214 aa9.4□□□□□ -0.9
SP140-201ENST00000343805 DPPA5A6NC42 116 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 KRT86O43790 486 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 RHOBTB3O94955 611 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 RNASE9P60153 205 aaKnown RBP9.39□□□□□ -0.91
SP140-201ENST00000343805 BYSLQ13895 437 aaKnown RBP9.39□□□□□ -0.91
SP140-201ENST00000343805 CCSAPQ6IQ19 270 aaPredicted RBP9.39□□□□□ -0.91
SP140-201ENST00000343805 FAM196AQ6ZSG2 479 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 REXO1Q8N1G1 1221 aaKnown RBP9.39□□□□□ -0.91
SP140-201ENST00000343805 CNBD1Q8NA66 436 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 KIAA0895Q8NCT3 520 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 ZNF507Q8TCN5 953 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 P3H4Q92791 437 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 RPGRQ92834 1020 aaKnown RBP9.39□□□□□ -0.91
SP140-201ENST00000343805 ATP6V0A1Q93050 837 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 DHX36Q9H2U1 1008 aaKnown RBP9.39□□□□□ -0.91
SP140-201ENST00000343805 MLXIPQ9HAP2 919 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 SPC25Q9HBM1 224 aa9.39□□□□□ -0.91
SP140-201ENST00000343805 CAPN11Q9UMQ6 739 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms