RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 OR6P1Q8NGX9 317 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 SH3TC2Q8TF17 1288 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 SEPT1Q8WYJ6 367 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 TUFT1Q9NNX1 390 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 KPNA7A9QM74 516 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 EYA4O95677 639 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 TRIM49P0CI25 452 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 TRIM49CP0CI26 452 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 ARHGDIAP52565 204 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 ST8SIA6P61647 398 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 LBRQ14739 615 aaKnown RBP15.95■□□□□ 0.14
UBE3B-202ENST00000342494 TRIM54Q9BYV2 358 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 MTMR4Q9NYA4 1195 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 BFARQ9NZS9 450 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 EMSYQ7Z589 1322 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 DNAJC6O75061 913 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 MYBL1P10243 752 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 GMPSP49915 693 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-202ENST00000342494 POU5F1BQ06416 359 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 CDKL3Q8IVW4 592 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-202ENST00000342494 PGBD3Q8N328 593 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 GTSE1Q9NYZ3 720 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 FLT1P17948 1338 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 DFFAO00273 331 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 CETPP11597 493 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 WDR72Q3MJ13 1102 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 PRAMEF18Q5VWM3 479 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 TTC7AQ9ULT0 858 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-202ENST00000342494 UBA6A0AVT1 1052 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-202ENST00000342494 DGAT1O75907 488 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 CELF2O95319 508 aaKnown RBP15.94■□□□□ 0.14
UBE3B-202ENST00000342494 NDUFB10O96000 172 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 WDR75Q8IWA0 830 aaKnown RBP15.94■□□□□ 0.14
UBE3B-202ENST00000342494 APPL2Q8NEU8 664 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 TRPV6Q9H1D0 765 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 PACSIN2Q9UNF0 486 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-202ENST00000342494 PSMD14O00487 310 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 FTLP02792 175 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-202ENST00000342494 GAS2L3Q86XJ1 694 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 LZICQ8WZA0 190 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 AGAP1Q9UPQ3 857 aa15.94■□□□□ 0.14
UBE3B-202ENST00000342494 HSD17B4P51659 736 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 GFPT1Q06210 699 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 CAPRIN1Q14444 709 aaKnown RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 KLHL29Q96CT2 875 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 PPP1R12AO14974 1030 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 SRGAP2O75044 1071 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 ESRRAP11474 423 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 SREBF2Q12772 1141 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 LMBRD2Q68DH5 695 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 DDX56Q9NY93 547 aaKnown RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 NFU1Q9UMS0 254 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 ZCCHC11Q5TAX3 1644 aaKnown RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 STXBP3O00186 592 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 COPS2P61201 443 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 ZNF467Q7Z7K2 595 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 LCA5Q86VQ0 697 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 GUF1Q8N442 669 aaKnown RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 RGL1Q9NZL6 768 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 KIAA0391O15091 583 aaKnown RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 RPS6KA5O75582 802 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 ROR1Q01973 937 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 TRMT10CQ7L0Y3 403 aaKnown RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 EFHBQ8N7U6 833 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 TMEM143Q96AN5 459 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 TRAIPQ9BWF2 469 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 TXLNGQ9NUQ3 528 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 SNX9Q9Y5X1 595 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 SLC25A27O95847 323 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 ZNF543Q08ER8 600 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 SF3B3Q15393 1217 aaKnown RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 PDCD2Q16342 344 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 CDC42EP5Q6NZY7 148 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 GPRC5AQ8NFJ5 357 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 EPAS1Q99814 870 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 TIPINQ9BVW5 301 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 SYNDIG1Q9H7V2 258 aa15.93■□□□□ 0.14
UBE3B-202ENST00000342494 TSR3Q9UJK0 312 aaKnown RBP15.93■□□□□ 0.14
UBE3B-202ENST00000342494 PRRG1O14668 218 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 NR3C2P08235 984 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 ZFXP17010 805 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-202ENST00000342494 ALS2CLQ60I27 953 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 FAM151AQ8WW52 585 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 TRIM15Q9C019 465 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 ABHD10Q9NUJ1 306 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-202ENST00000342494 MAGEB2O15479 319 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 RBP5P82980 135 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 KCNA1Q09470 495 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 KLHL38Q2WGJ6 581 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 HHIPL2Q6UWX4 724 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 RAB42Q8N4Z0 105 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 CCNYL1Q8N7R7 359 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 PLEKHA5Q9HAU0 1116 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 KDM6AO15550 1401 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-202ENST00000342494 ATP8B1O43520 1251 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 ASMTLO95671 621 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 EEF1B2P24534 225 aaKnown RBP15.92■□□□□ 0.14
UBE3B-202ENST00000342494 CDH6P55285 790 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 RHOT1Q8IXI2 618 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms