RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 LRCH2Q5VUJ6 765 aa18.95■□□□□ 0.62
TRA2B-202ENST00000342294 DHX32Q7L7V1 743 aaKnown RBP18.95■□□□□ 0.62
TRA2B-202ENST00000342294 CCDC12Q8WUD4 166 aaPredicted RBP18.95■□□□□ 0.62
TRA2B-202ENST00000342294 SHDQ96IW2 340 aa18.95■□□□□ 0.62
TRA2B-202ENST00000342294 NLRP4Q96MN2 994 aa18.95■□□□□ 0.62
TRA2B-202ENST00000342294 PRKD2Q9BZL6 878 aa18.95■□□□□ 0.62
TRA2B-202ENST00000342294 FBXO4Q9UKT5 387 aa18.95■□□□□ 0.62
TRA2B-202ENST00000342294 SPTLC1O15269 473 aa18.94■□□□□ 0.62
TRA2B-202ENST00000342294 GAS2O43903 313 aaKnown RBP18.94■□□□□ 0.62
TRA2B-202ENST00000342294 NCLP19338 710 aaKnown RBP18.94■□□□□ 0.62
TRA2B-202ENST00000342294 SDHBP21912 280 aa18.94■□□□□ 0.62
TRA2B-202ENST00000342294 USP11P51784 963 aa18.94■□□□□ 0.62
TRA2B-202ENST00000342294 GPC5P78333 572 aa18.94■□□□□ 0.62
TRA2B-202ENST00000342294 GET4Q7L5D6 327 aaPredicted RBP18.94■□□□□ 0.62
TRA2B-202ENST00000342294 MIER3Q7Z3K6 550 aa18.94■□□□□ 0.62
TRA2B-202ENST00000342294 GPR161Q8N6U8 529 aaKnown RBP18.94■□□□□ 0.62
TRA2B-202ENST00000342294 ST13P5Q8NFI4 369 aaPredicted RBP18.94■□□□□ 0.62
TRA2B-202ENST00000342294 MINDY3Q9H8M7 445 aa18.94■□□□□ 0.62
TRA2B-202ENST00000342294 PIDD1Q9HB75 910 aa18.94■□□□□ 0.62
TRA2B-202ENST00000342294 ZFP37Q9Y6Q3 630 aaPredicted RBP18.94■□□□□ 0.62
TRA2B-202ENST00000342294 KANSL1LA0AUZ9 987 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 F8W810 466 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 TGM5O43548 720 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 ANO5Q75V66 913 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 SRGAP1Q7Z6B7 1085 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 PALB2Q86YC2 1186 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 GPR65Q8IYL9 337 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 SMG8Q8ND04 991 aaKnown RBP18.93■□□□□ 0.62
TRA2B-202ENST00000342294 NCDNQ9UBB6 729 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 PCDHGA2Q9Y5H1 932 aa18.93■□□□□ 0.62
TRA2B-202ENST00000342294 DDX11L8A8MPP1 907 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 PRPF3O43395 683 aaKnown RBP18.92■□□□□ 0.62
TRA2B-202ENST00000342294 OR1G1P47890 313 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 PARM1Q6UWI2 310 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 ZBTB44Q8NCP5 570 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 BICD2Q8TD16 824 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 NELL1Q92832 810 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 FGF14Q92915 247 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 JPH2Q9BR39 696 aaPredicted RBP18.92■□□□□ 0.62
TRA2B-202ENST00000342294 BCO2Q9BYV7 579 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 OSBPL6Q9BZF3 934 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 UBN1Q9NPG3 1134 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 MIOSQ9NXC5 875 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 FNIP2Q9P278 1114 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 MTF2Q9Y483 593 aaPredicted RBP18.92■□□□□ 0.62
TRA2B-202ENST00000342294 COL4A3BPQ9Y5P4 624 aa18.92■□□□□ 0.62
TRA2B-202ENST00000342294 ARL5CA6NH57 179 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 LAMTOR5O43504 91 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 LILRB5O75023 590 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 ZMYND10O75800 440 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 TGM1P22735 817 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 SNW1Q13573 536 aaKnown RBP18.91■□□□□ 0.62
TRA2B-202ENST00000342294 ADCK5Q3MIX3 580 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 TSGA10IPQ3SY00 556 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 Q4G0T1 1027 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 CNNM3Q8NE01 707 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 PHKBQ93100 1093 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 B3GALT6Q96L58 329 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 MBOAT7Q96N66 472 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 GPR62Q9BZJ7 368 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 ANO2Q9NQ90 1003 aa18.91■□□□□ 0.62
TRA2B-202ENST00000342294 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.91■□□□□ 0.62
TRA2B-202ENST00000342294 SPATA6Q9NWH7 488 aaPredicted RBP18.91■□□□□ 0.62
TRA2B-202ENST00000342294 CCDC196A0A1B0GTZ2 297 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 PRR5-ARHGAP8B1AHC4 643 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 ITGA4P13612 1032 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 FSHRP23945 695 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 ARHGAP8P85298 464 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 PRKCQQ04759 706 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 CSTF1Q05048 431 aaKnown RBP18.9■□□□□ 0.62
TRA2B-202ENST00000342294 MLF2Q15773 248 aaPredicted RBP18.9■□□□□ 0.62
TRA2B-202ENST00000342294 SLC44A4Q53GD3 710 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 RNF20Q5VTR2 975 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 PLA2G4FQ68DD2 849 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 PRPF31Q8WWY3 499 aaKnown RBP18.9■□□□□ 0.62
TRA2B-202ENST00000342294 GAD1Q99259 594 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 EPC1Q9H2F5 836 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 CDH7Q9ULB5 785 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 IPPQ9Y573 584 aa18.9■□□□□ 0.62
TRA2B-202ENST00000342294 CYP3A7-CYP3A51PA0A087WV96 503 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 CYP3A7P24462 503 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 PSMC5P62195 406 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 LMNB2Q03252 620 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 RASEFQ8IZ41 740 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 ZNF579Q8NAF0 562 aaKnown RBP18.89■□□□□ 0.61
TRA2B-202ENST00000342294 ATRIPQ8WXE1 791 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 COLEC11Q9BWP8 271 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 DHX33Q9H6R0 707 aaKnown RBP18.89■□□□□ 0.61
TRA2B-202ENST00000342294 ZSCAN32Q9NX65 697 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 COL4A3Q01955 1670 aa18.89■□□□□ 0.61
TRA2B-202ENST00000342294 FAM170BA6NMN3 283 aa18.88■□□□□ 0.61
TRA2B-202ENST00000342294 SRGAP2CP0DJJ0 459 aa18.88■□□□□ 0.61
TRA2B-202ENST00000342294 RPL17P18621 184 aaKnown RBP18.88■□□□□ 0.61
TRA2B-202ENST00000342294 MLH1P40692 756 aa18.88■□□□□ 0.61
TRA2B-202ENST00000342294 MAGEA9P43362 315 aa18.88■□□□□ 0.61
TRA2B-202ENST00000342294 SCNN1GP51170 649 aa18.88■□□□□ 0.61
TRA2B-202ENST00000342294 NPEPPSP55786 919 aa18.88■□□□□ 0.61
TRA2B-202ENST00000342294 LAMTOR4Q0VGL1 99 aa18.88■□□□□ 0.61
TRA2B-202ENST00000342294 USP41Q3LFD5 358 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms