RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 FBXO47Q5MNV8 452 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 IER5Q5VY09 327 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 MCTP1Q6DN14 999 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 FAM109BQ6ICB4 259 aaPredicted RBP11.44□□□□□ -0.58
TPM3-207ENST00000341372 POTEHQ6S545 545 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 BRAPQ7Z569 592 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 HSCBQ8IWL3 235 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 PHOSPHO2Q8TCD6 241 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 APBB2Q92870 758 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 DYDC2Q96IM9 177 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 SLC9A7Q96T83 725 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 ADAMTS1Q9UHI8 967 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 A6NHS1 94 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 SLITRK3O94933 977 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 PRPHP41219 470 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 WDR5P61964 334 aaKnown RBP11.43□□□□□ -0.58
TPM3-207ENST00000341372 LPIN1Q14693 890 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 FAM43BQ6ZT52 329 aaPredicted RBP11.43□□□□□ -0.58
TPM3-207ENST00000341372 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 DBF4BQ8NFT6 615 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 RGL1Q9NZL6 768 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 SLC4A7Q9Y6M7 1214 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 COL4A6Q14031 1691 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 TMEM150BA6NC51 233 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 GHRP10912 638 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 SYT1P21579 422 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 ATP2C1P98194 919 aaPredicted RBP11.43□□□□□ -0.58
TPM3-207ENST00000341372 TBC1D8BQ0IIM8 1120 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 SEPT8Q92599 483 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 FOXJ1Q92949 421 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 MYO19Q96H55 970 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 IFIH1Q9BYX4 1025 aaKnown RBP11.43□□□□□ -0.58
TPM3-207ENST00000341372 CELF4Q9BZC1 486 aaKnown RBP11.43□□□□□ -0.58
TPM3-207ENST00000341372 CYP26B1Q9NR63 512 aa11.43□□□□□ -0.58
TPM3-207ENST00000341372 MYH15Q9Y2K3 1946 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 M0QZ92 97 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 SH3BP5O60239 455 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 MAFO75444 373 aaPredicted RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 SPATA31C1P0DKV0 1188 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 ATP2A2P16615 1042 aaKnown RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 MUTP22033 750 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 TMOD1P28289 359 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 YWHABP31946 246 aaKnown RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 CDKN1CP49918 316 aaPredicted RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 MMP16P51512 607 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 CLCN3P51790 818 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 CYP4A11Q02928 519 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 IKBKEQ14164 716 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 CTTNQ14247 550 aaKnown RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 MTERF2Q49AM1 385 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 MSS51Q4VC12 460 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 EFCAB12Q6NXP0 572 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 TRMT1LQ7Z2T5 733 aaKnown RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 IGSF22Q8N9C0 903 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 EPS8L3Q8TE67 593 aaKnown RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 POLR3CQ9BUI4 534 aaPredicted RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 PBX4Q9BYU1 374 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 TMX1Q9H3N1 280 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 DHX33Q9H6R0 707 aaKnown RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 TUFT1Q9NNX1 390 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 GEMIN8Q9NWZ8 242 aaKnown RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 GPR32O75388 356 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 USP17L7P0C7H9 530 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 TECP42680 631 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 FOXK2Q01167 660 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 RESTQ13127 1097 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 SQSTM1Q13501 440 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 PDIA5Q14554 519 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 TMEM266Q2M3C6 531 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 PLA2G4FQ68DD2 849 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 JAMLQ86YT9 394 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 LRRC71Q8N4P6 559 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 MAP7D2Q96T17 732 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 JPH2Q9BR39 696 aaPredicted RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 FAM126AQ9BYI3 521 aaPredicted RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 AGO3Q9H9G7 860 aaKnown RBP11.42□□□□□ -0.58
TPM3-207ENST00000341372 ANKEF1Q9NU02 776 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 MTMR6Q9Y217 621 aa11.42□□□□□ -0.58
TPM3-207ENST00000341372 TTC3P53804 2025 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 VPS37CA5D8V6 355 aaPredicted RBP11.41□□□□□ -0.58
TPM3-207ENST00000341372 GRXCR1A8MXD5 290 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 NR1I2O75469 434 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 RPA1P27694 616 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 KCNJ6P48051 423 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 DEFB103AP81534 67 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 TMEM62Q0P6H9 643 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 RAB30Q15771 203 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 OTUD6AQ7L8S5 288 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 CATSPER3Q86XQ3 398 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 SLC9A9Q8IVB4 645 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 TPH2Q8IWU9 490 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 METTL13Q8N6R0 699 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 TMEM40Q8WWA1 233 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 DNAJC25Q9H1X3 360 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 ADAMTS10Q9H324 1103 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 PCDHA11Q9Y5I1 949 aa11.41□□□□□ -0.58
TPM3-207ENST00000341372 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.4□□□□□ -0.58
TPM3-207ENST00000341372 RBAK-RBAKDNI3L0D1 243 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 GAS2O43903 313 aaKnown RBP11.4□□□□□ -0.58
TPM3-207ENST00000341372 MED24O75448 989 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms