RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 VAMP7P51809 220 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 LRRC41Q15345 812 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 EPC2Q52LR7 807 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 MARCH8Q5T0T0 291 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 EFCAB12Q6NXP0 572 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 WDR49Q8IV35 697 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 PRPF31Q8WWY3 499 aaKnown RBP7.81□□□□□ -1.16
NUP43-201ENST00000340413 CGRRF1Q99675 332 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 BEGAINQ9BUH8 593 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 GCOM2Q9BZD3 368 aaPredicted RBP7.81□□□□□ -1.16
NUP43-201ENST00000340413 GANQ9H2C0 597 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 ZHX3Q9H4I2 956 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 ASB7Q9H672 318 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 PLAGL2Q9UPG8 496 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 LUC7L2Q9Y383 392 aaKnown RBP7.81□□□□□ -1.16
NUP43-201ENST00000340413 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.81□□□□□ -1.16
NUP43-201ENST00000340413 BTNL10A8MVZ5 291 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 RBAK-RBAKDNI3L0D1 243 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 PRKCBP05771 671 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 FMO5P49326 533 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 FLT3LGP49771 235 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 CRYBB1P53674 252 aaPredicted RBP7.81□□□□□ -1.16
NUP43-201ENST00000340413 NCBP1Q09161 790 aaKnown RBP7.81□□□□□ -1.16
NUP43-201ENST00000340413 KCNH2Q12809 1159 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 TCEAL1Q15170 157 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 TMEM139Q8IV31 216 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 TRPV1Q8NER1 839 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 ADAMTS10Q9H324 1103 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 VRTNQ9H8Y1 702 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 ABHD10Q9NUJ1 306 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.81□□□□□ -1.16
NUP43-201ENST00000340413 INTUQ9ULD6 942 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 PHF24Q9UPV7 400 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.81□□□□□ -1.16
NUP43-201ENST00000340413 CCDC169A6NNP5 214 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 B4GALT4O60513 344 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 EXOC3O60645 756 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 PEX10O60683 326 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 GYPCP04921 128 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 PTK7Q13308 1070 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 TUBB2AQ13885 445 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 C1orf53Q5VUE5 145 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 RNF180Q86T96 592 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 SPATA18Q8TC71 538 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 TUBB2BQ9BVA1 445 aa7.81□□□□□ -1.16
NUP43-201ENST00000340413 LUC7LQ9NQ29 371 aaKnown RBP7.81□□□□□ -1.16
NUP43-201ENST00000340413 A0A087WWV3 80 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 FAM189A1O60320 539 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 SKIP12755 728 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 FERP16591 822 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 KLRC1P26715 233 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 JAM2P57087 298 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 AMHR2Q16671 573 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 SLC39A4Q6P5W5 647 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 PDXDC1Q6P996 788 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 NELFCDQ8IXH7 590 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 ANKLE1Q8NAG6 615 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 ARRDC4Q8NCT1 418 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 COPS5Q92905 334 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 HPS3Q969F9 1004 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 GTF2IRD1Q9UHL9 959 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 LCMT1Q9UIC8 334 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 ADGRA3Q8IWK6 1321 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 INPPL1O15357 1258 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 CYP2B6P20813 491 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 ATICP31939 592 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 GRM5P41594 1212 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 PRKCZQ05513 592 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 CACNB2Q08289 660 aaPredicted RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 SNRNP35Q16560 246 aaKnown RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 KRT39Q6A163 491 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 GLIS3Q8NEA6 775 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 ZFP91Q96JP5 570 aaPredicted RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 BAG1Q99933 345 aaPredicted RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 TSGA10Q9BZW7 698 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 BCAS3Q9H6U6 928 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 AGO2Q9UKV8 859 aaKnown RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 EIF3CLB5ME19 914 aaKnown RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 AOC2O75106 756 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 CLTAP09496 248 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 CYLC1P35663 651 aaPredicted RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 TERF1P54274 439 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 YWHAEP62258 255 aaKnown RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 KRT83P78385 493 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 MYL7Q01449 175 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 CACNB1Q02641 598 aaPredicted RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 GCNT1Q02742 428 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 NOLC1Q14978 699 aaKnown RBP eCLIP7.8□□□□□ -1.16
NUP43-201ENST00000340413 SYCP1Q15431 976 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 EXOC3L4Q17RC7 722 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 ZC2HC1CQ53FD0 456 aaPredicted RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 ZNF677Q86XU0 584 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 PARD3BQ8TEW8 1205 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 EIF3CQ99613 913 aaKnown RBP7.8□□□□□ -1.16
NUP43-201ENST00000340413 STK33Q9BYT3 514 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 VPS16Q9H269 839 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 KCNF1Q9H3M0 494 aa7.8□□□□□ -1.16
NUP43-201ENST00000340413 RNPEPQ9H4A4 650 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms