RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 AGMOQ6ZNB7 445 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 MRPL10Q7Z7H8 261 aaKnown RBP16.79■□□□□ 0.28
UBE3B-201ENST00000340074 TMEM192Q8IY95 271 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 TMEM161BQ8NDZ6 487 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 DNAJC19Q96DA6 116 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 PGBD4Q96DM1 585 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 SAMD11Q96NU1 681 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 CUEDC2Q9H467 287 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 PDZD7Q9H5P4 517 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 HCSTQ9UBK5 93 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 CIZ1Q9ULV3 898 aaPredicted RBP16.79■□□□□ 0.28
UBE3B-201ENST00000340074 HES2Q9Y543 173 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 A0A1B0GVL5 298 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 N4BP3O15049 544 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 TRAK2O60296 914 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 MAPTP10636 758 aaKnown RBP16.78■□□□□ 0.28
UBE3B-201ENST00000340074 CMA1P23946 247 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 CNNM3Q8NE01 707 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 FBXO22Q8NEZ5 403 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 GAS2L1Q99501 681 aaPredicted RBP16.78■□□□□ 0.28
UBE3B-201ENST00000340074 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 TNMDQ9H2S6 317 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 NXF3Q9H4D5 531 aaKnown RBP16.78■□□□□ 0.28
UBE3B-201ENST00000340074 TYW1Q9NV66 732 aaKnown RBP16.78■□□□□ 0.28
UBE3B-201ENST00000340074 KBTBD4Q9NVX7 518 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
UBE3B-201ENST00000340074 PRRC2BQ5JSZ5 2229 aaKnown RBP16.77■□□□□ 0.28
UBE3B-201ENST00000340074 ITGA4P13612 1032 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 FOSL2P15408 326 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 PFKFB1P16118 471 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 CTNNB1P35222 781 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 STRN3Q13033 797 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 ADGRE1Q14246 886 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 SPOUT1Q5T280 376 aaKnown RBP16.77■□□□□ 0.27
UBE3B-201ENST00000340074 ATF7IP2Q5U623 682 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 EEF1DP3Q658K8 133 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 HAUS6Q7Z4H7 955 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 FAM178BQ8IXR5 827 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 GDPD5Q8WTR4 605 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 FIZ1Q96SL8 496 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 ACO2Q99798 780 aaKnown RBP16.77■□□□□ 0.27
UBE3B-201ENST00000340074 APOL6Q9BWW8 343 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 MRPL4Q9BYD3 311 aaKnown RBP16.77■□□□□ 0.27
UBE3B-201ENST00000340074 RWDD3Q9Y3V2 267 aa16.77■□□□□ 0.27
UBE3B-201ENST00000340074 H0YCG3 227 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 K7ENM7 598 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 LPXNO60711 386 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 OFD1O75665 1012 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 BMPR1AP36894 532 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 LRRC43Q8N309 656 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 ADPGKQ9BRR6 497 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 TARS2Q9BW92 718 aaKnown RBP16.76■□□□□ 0.27
UBE3B-201ENST00000340074 CWH43Q9H720 699 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 RSAD1Q9HA92 442 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 HPSEQ9Y251 543 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 INPP5FQ9Y2H2 1132 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 STXBP5LQ9Y2K9 1186 aa16.76■□□□□ 0.27
UBE3B-201ENST00000340074 PDCD11Q14690 1871 aaKnown RBP16.76■□□□□ 0.27
UBE3B-201ENST00000340074 C5orf67F2Z3F1 127 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 IDEP14735 1019 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 IGFBP4P22692 258 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 AKAP5P24588 427 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 NMT1P30419 496 aaKnown RBP16.75■□□□□ 0.27
UBE3B-201ENST00000340074 AFF1P51825 1210 aaKnown RBP16.75■□□□□ 0.27
UBE3B-201ENST00000340074 AMPD3Q01432 767 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 NOMO2Q5JPE7 1267 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 HACE1Q8IYU2 909 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 PYM1Q9BRP8 204 aaKnown RBP16.75■□□□□ 0.27
UBE3B-201ENST00000340074 MRPL9Q9BYD2 267 aaKnown RBP16.75■□□□□ 0.27
UBE3B-201ENST00000340074 LRRC27Q9C0I9 530 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 PANK4Q9NVE7 773 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 TNFSF13BQ9Y275 285 aa16.75■□□□□ 0.27
UBE3B-201ENST00000340074 A0A1W2PQ27 194 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 A0A1W2PQ64 194 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 A0A1W2PQD8 194 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 FRMD3A2A2Y4 597 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 H3BNC9 293 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 RB1P06400 928 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 GAP43P17677 238 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 NDUFA8P51970 172 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 GPM6BQ13491 265 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 DCAF4L1Q3SXM0 396 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 CEP57L1Q8IYX8 460 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 FSIP1Q8NA03 581 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 KCNN1Q92952 543 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 GAD1Q99259 594 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 PLVAPQ9BX97 442 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 TRIM9Q9C026 710 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 MAGEF1Q9HAY2 307 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 PTPRHQ9HD43 1115 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 UBN1Q9NPG3 1134 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 TBC1D13Q9NVG8 400 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 CHMP5Q9NZZ3 219 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 TBC1D7Q9P0N9 293 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 SERTAD1Q9UHV2 236 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 TBX20Q9UMR3 447 aa16.74■□□□□ 0.27
UBE3B-201ENST00000340074 MYO7AQ13402 2215 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms