RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 B4GALT6Q9UBX8 382 aa3.89□□□□□ -1.79
XRCC4-202ENST00000338635 MYPNQ86TC9 1320 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 UNC119BA6NIH7 251 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 PLD2O14939 933 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 PCDH8O95206 1070 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 RAPGEF3O95398 923 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 LY86O95711 162 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 ZSCAN20P17040 1043 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-202ENST00000338635 ELLP55199 621 aaPredicted RBP3.88□□□□□ -1.79
XRCC4-202ENST00000338635 TAS1R1Q7RTX1 841 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 GPRIN1Q7Z2K8 1008 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 PLXDC1Q8IUK5 500 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 BOLLQ8N9W6 283 aaKnown RBP3.88□□□□□ -1.79
XRCC4-202ENST00000338635 FAM98AQ8NCA5 519 aaKnown RBP3.88□□□□□ -1.79
XRCC4-202ENST00000338635 CLUHP3Q96NS8 147 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 TOMM22Q9NS69 142 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 INTS7Q9NVH2 962 aaKnown RBP3.88□□□□□ -1.79
XRCC4-202ENST00000338635 TESQ9UGI8 421 aaKnown RBP3.88□□□□□ -1.79
XRCC4-202ENST00000338635 CLCA2Q9UQC9 943 aa3.88□□□□□ -1.79
XRCC4-202ENST00000338635 DIRC3C9JPN6 131 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 OPA1O60313 960 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 ASLP04424 464 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 DUSP2Q05923 314 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 ABHD17BQ5VST6 288 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 SYT12Q8IV01 421 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 ZNF428Q96B54 188 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 LRFN3Q9BTN0 628 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 SPATA5L1Q9BVQ7 753 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 HIRIP3Q9BW71 556 aaPredicted RBP3.87□□□□□ -1.79
XRCC4-202ENST00000338635 TANGO6Q9C0B7 1094 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 PODXL2Q9NZ53 605 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 SPO11Q9Y5K1 396 aa3.87□□□□□ -1.79
XRCC4-202ENST00000338635 ESRRBO95718 433 aa3.86□□□□□ -1.79
XRCC4-202ENST00000338635 DDX6P26196 483 aaKnown RBP eCLIP3.86□□□□□ -1.79
XRCC4-202ENST00000338635 GTF2F1P35269 517 aaKnown RBP eCLIP3.86□□□□□ -1.79
XRCC4-202ENST00000338635 TP53BP2Q13625 1128 aa3.86□□□□□ -1.79
XRCC4-202ENST00000338635 PDCD4Q53EL6 469 aaKnown RBP3.86□□□□□ -1.79
XRCC4-202ENST00000338635 PIK3R6Q5UE93 754 aa3.86□□□□□ -1.79
XRCC4-202ENST00000338635 SP5Q6BEB4 398 aaPredicted RBP3.86□□□□□ -1.79
XRCC4-202ENST00000338635 ZZZ3Q8IYH5 903 aa3.86□□□□□ -1.79
XRCC4-202ENST00000338635 SRPK1Q96SB4 655 aaKnown RBP3.86□□□□□ -1.79
XRCC4-202ENST00000338635 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.86□□□□□ -1.79
XRCC4-202ENST00000338635 USP36Q9P275 1121 aaKnown RBP3.86□□□□□ -1.79
XRCC4-202ENST00000338635 USP18Q9UMW8 372 aa3.86□□□□□ -1.79
XRCC4-202ENST00000338635 PCDHB6Q9Y5E3 794 aa3.86□□□□□ -1.79
XRCC4-202ENST00000338635 PTCH2Q9Y6C5 1203 aa3.86□□□□□ -1.79
XRCC4-202ENST00000338635 PROB1E7EW31 1015 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 CBX4O00257 560 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 ELL2O00472 640 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 C1RP00736 705 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 HLA-DOAP06340 250 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 MPLP40238 635 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 BLOC1S1P78537 153 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 ZNF460Q14592 562 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 NAALADL2Q58DX5 795 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 DRICH1Q6PGQ1 229 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 UBE2R2Q712K3 238 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 HOMEZQ8IX15 550 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 MSL3Q8N5Y2 521 aaKnown RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 OR10H5Q8NGA6 315 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 CAGE1Q8TC20 777 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 ADAM2Q99965 735 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 ALG13Q9NP73 1137 aaKnown RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 OXSMQ9NWU1 459 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 POGKQ9P215 609 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 MAP3K2Q9Y2U5 619 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 POLR2AP24928 1970 aaKnown RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 DNAJC8O75937 253 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 CLEC2LP0C7M8 214 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 RBP3P10745 1247 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 EGR2P11161 476 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 APBA1Q02410 837 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 RESTQ13127 1097 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 DDB1Q16531 1140 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 FNDC3BQ53EP0 1204 aaKnown RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 C2orf27AQ580R0 203 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 ZNF362Q5T0B9 420 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 CREB3L3Q68CJ9 461 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 CDCA2Q69YH5 1023 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-202ENST00000338635 EFCAB12Q6NXP0 572 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 BTNL9Q6UXG8 535 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 CDYL2Q8N8U2 506 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 ASB10Q8WXI3 467 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 ZMAT4Q9H898 229 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 RNF181Q9P0P0 153 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 TLK1Q9UKI8 766 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 FRMD4BQ9Y2L6 1034 aa3.85□□□□□ -1.79
XRCC4-202ENST00000338635 SALL3Q9BXA9 1300 aa3.84□□□□□ -1.79
XRCC4-202ENST00000338635 SPDEFO95238 335 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 SPATA31D3P0C874 917 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 XPAP23025 273 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-202ENST00000338635 FLT3P36888 993 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 RBL2Q08999 1139 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 MPP3Q13368 585 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 ANKS6Q68DC2 871 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 SPATA31D4Q6ZUB0 917 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 SLC9A6Q92581 669 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 FERMT2Q96AC1 680 aa3.84□□□□□ -1.8
XRCC4-202ENST00000338635 FDXACB1Q9BRP7 624 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-202ENST00000338635 BRIP1Q9BX63 1249 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms