RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NPY5RQ15761 445 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 GLIS3Q8NEA6 775 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 TMEM143Q96AN5 459 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 GGCXP38435 758 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 MYO1EQ12965 1108 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 DUOXA2Q1HG44 320 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 P3H4Q92791 437 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 RBM12Q9NTZ6 932 aaKnown RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 H7C0C1 242 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 ATP5OP48047 213 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 TRIM65Q6PJ69 517 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SLC35C1Q96A29 364 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 KCPQ6ZWJ8 1503 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 MEIS2O14770 477 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 CCT5P48643 541 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 TTC16Q8NEE8 873 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 RNF25Q96BH1 459 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 MMP19Q99542 508 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 CBWD1Q9BRT8 395 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 ALG6Q9Y672 507 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 UBE4BO95155 1302 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 ABCC6O95255 1503 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 ACTR2P61160 394 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 ADCY1Q08828 1119 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 LGSNQ5TDP6 509 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 CYP4F22Q6NT55 531 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 BTNL9Q6UXG8 535 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 VSIG1Q86XK7 387 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SLC35G2Q8TBE7 412 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SREK1Q8WXA9 508 aaKnown RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 HVCN1Q96D96 273 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 TNFAIP2Q03169 654 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 RFX6Q8HWS3 928 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 LRRC71Q8N4P6 559 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 GLIS2Q9BZE0 524 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 C17orf75Q9HAS0 396 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SUCLA2Q9P2R7 463 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 TBX20Q9UMR3 447 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 POC1B-GALNT4F8VUJ3 575 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 PRKCBP05771 671 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SLCO1A2P46721 670 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 CCDC14Q49A88 953 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 HNRNPLLQ8WVV9 542 aaKnown RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 KIFC3Q9BVG8 833 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 IFT122Q9HBG6 1241 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 A6NJR5 290 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 EMC2Q15006 297 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 WDR72Q3MJ13 1102 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 RSPH3Q86UC2 560 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 FBF1Q8TES7 1133 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PLCD4Q9BRC7 762 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 VIPAS39Q9H9C1 493 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 EHD2Q9NZN4 543 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PRLRP16471 622 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 NR1D1P20393 614 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 C6orf163Q5TEZ5 329 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 GKAP1Q5VSY0 366 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 CDR2LQ86X02 465 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 TRIM50Q86XT4 487 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 MS4A14Q96JA4 679 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 TRIM7Q9C029 511 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 CHORDC1Q9UHD1 332 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 EML1O00423 815 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PHBP35232 272 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 RARRES1P49788 294 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 HNRNPH2P55795 449 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 DYNLT1P63172 113 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 ZNF699Q32M78 642 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 FYB2Q5VWT5 728 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 USP38Q8NB14 1042 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 RBM41Q96IZ5 413 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 MED10Q9BTT4 135 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 MYH15Q9Y2K3 1946 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 DDNO94850 711 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 DSG3P32926 999 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 NPTX2P47972 431 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 ERO1BQ86YB8 467 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 CBWD2Q8IUF1 395 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 KCND1Q9NSA2 647 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 L1RE1Q9UN81 338 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PSMD10O75832 226 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 STK10O94804 968 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 CCDC13Q8IYE1 715 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 SLC30A5Q8TAD4 765 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 TARS2Q9BW92 718 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 SLITRK6Q9H5Y7 841 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 TMEM8AQ9HCN3 771 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 CYP26B1Q9NR63 512 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PPP1R11O60927 126 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PGM5Q15124 567 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 HAUS1Q96CS2 278 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 RPS6KC1Q96S38 1066 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 UVRAGQ9P2Y5 699 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 SLIT2O94813 1529 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 DHX34Q14147 1143 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 MEA1Q16626 185 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 RHOT1Q8IXI2 618 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PACSIN1Q9BY11 444 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 MYH7P12883 1935 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms