RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 COLGALT2Q8IYK4 626 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 RNF168Q8IYW5 571 aaPredicted RBP12.84□□□□□ -0.35
CSMD2-202ENST00000338325 ZNF579Q8NAF0 562 aaKnown RBP12.84□□□□□ -0.35
CSMD2-202ENST00000338325 SMG8Q8ND04 991 aaKnown RBP12.84□□□□□ -0.35
CSMD2-202ENST00000338325 TMEM143Q96AN5 459 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 CEP170P1Q96L14 293 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 VAV3Q9UKW4 847 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 MIA3Q5JRA6 1907 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 MYH15Q9Y2K3 1946 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 GAS2O43903 313 aaKnown RBP12.83□□□□□ -0.35
CSMD2-202ENST00000338325 RFPL2O75678 378 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 DEXIO95424 95 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 EFEMP2O95967 443 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 P4HBP07237 508 aaKnown RBP12.83□□□□□ -0.35
CSMD2-202ENST00000338325 SRFP11831 508 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 PSMA5P28066 241 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 DSG1Q02413 1049 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 NPY5RQ15761 445 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 GALNT17Q6IS24 598 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 KRT25Q7Z3Z0 450 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 FAM177A1Q8N128 213 aaPredicted RBP12.83□□□□□ -0.35
CSMD2-202ENST00000338325 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 TCP11Q8WWU5 503 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 SMG7Q92540 1137 aaKnown RBP12.83□□□□□ -0.35
CSMD2-202ENST00000338325 NXPE3Q969Y0 559 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 MYADMQ96S97 322 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 SEMA4AQ9H3S1 761 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 KCNMB3Q9NPA1 279 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.35
CSMD2-202ENST00000338325 WRAP73Q9P2S5 460 aaPredicted RBP12.83□□□□□ -0.35
CSMD2-202ENST00000338325 CA14Q9ULX7 337 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 IPPQ9Y573 584 aa12.83□□□□□ -0.35
CSMD2-202ENST00000338325 ZNF292O60281 2723 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 ARL5CA6NH57 179 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 ASAP2O43150 1006 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 ERLIN2O94905 339 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 PAPLNO95428 1278 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 LMNAP02545 664 aaKnown RBP12.83□□□□□ -0.36
CSMD2-202ENST00000338325 MYBP10242 640 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 MLH1P40692 756 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 DSC1Q08554 894 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 EMC2Q15006 297 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 INF2Q27J81 1249 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 FERMT3Q86UX7 667 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 SLC44A3Q8N4M1 653 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 RNF149Q8NC42 400 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 KCNG4Q8TDN1 519 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 ZNF707Q96C28 371 aaPredicted RBP12.83□□□□□ -0.36
CSMD2-202ENST00000338325 CCDC51Q96ER9 411 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 GAD1Q99259 594 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 SLKQ9H2G2 1235 aaPredicted RBP12.83□□□□□ -0.36
CSMD2-202ENST00000338325 TBC1D17Q9HA65 648 aa12.83□□□□□ -0.36
CSMD2-202ENST00000338325 CPLX1O14810 134 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 TSPAN1O60635 241 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 NR1I2O75469 434 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 C1RP00736 705 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 AXLP30530 894 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 YWHABP31946 246 aaKnown RBP12.82□□□□□ -0.36
CSMD2-202ENST00000338325 SCNN1GP51170 649 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 PCBP1Q15365 356 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSMD2-202ENST00000338325 NOTUMQ6P988 496 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 CENPQQ7L2Z9 268 aaPredicted RBP12.82□□□□□ -0.36
CSMD2-202ENST00000338325 C4orf19Q8IY42 314 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 LXNQ9BS40 222 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 EIF2AQ9BY44 585 aaKnown RBP12.82□□□□□ -0.36
CSMD2-202ENST00000338325 PLEKHA4Q9H4M7 779 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 PIDD1Q9HB75 910 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 CHST7Q9NS84 486 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 ZDHHC7Q9NXF8 308 aa12.82□□□□□ -0.36
CSMD2-202ENST00000338325 DMXL1Q9Y485 3027 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 PATJQ8NI35 1801 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 CACNA1AO00555 2505 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 F8W810 466 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 SPATA31D3P0C874 917 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 GCFC2P16383 781 aaKnown RBP12.81□□□□□ -0.36
CSMD2-202ENST00000338325 NCBP1Q09161 790 aaKnown RBP12.81□□□□□ -0.36
CSMD2-202ENST00000338325 TOB2Q14106 344 aaPredicted RBP12.81□□□□□ -0.36
CSMD2-202ENST00000338325 EPHA7Q15375 998 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 XKR9Q5GH70 373 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 PPP4R3AQ6IN85 833 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 PHLDB3Q6NSJ2 640 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 SPATA31D4Q6ZUB0 917 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 GET4Q7L5D6 327 aaPredicted RBP12.81□□□□□ -0.36
CSMD2-202ENST00000338325 OTUD6AQ7L8S5 288 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 GPR152Q8TDT2 470 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 RIN2Q8WYP3 895 aaPredicted RBP12.81□□□□□ -0.36
CSMD2-202ENST00000338325 CPB2Q96IY4 423 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 ZFP42Q96MM3 310 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 AIFM3Q96NN9 605 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 MTRQ99707 1265 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 COLEC11Q9BWP8 271 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 NT5C3AQ9H0P0 336 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 ARHGEF3Q9NR81 526 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSMD2-202ENST00000338325 MIOSQ9NXC5 875 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms