RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ZNF568Q3ZCX4 644 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 SNRNP48Q6IEG0 339 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 TRIM72Q6ZMU5 477 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 RBM43Q6ZSC3 357 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 RSPH3Q86UC2 560 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 GRAMD1AQ96CP6 724 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 TRIM51Q9BSJ1 452 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 APEX2Q9UBZ4 518 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 CPSF3Q9UKF6 684 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 IQSEC2Q5JU85 1478 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 CDR2Q01850 454 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 TROAPQ12815 778 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 NAB2Q15742 525 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 RSBN1LQ6PCB5 846 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 SEPT12Q8IYM1 358 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 KCNV2Q8TDN2 545 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 ZNF526Q8TF50 670 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 KLHL8Q9P2G9 620 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 SLC4A1P02730 911 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 MYBL1P10243 752 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 SDC4P31431 198 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 TAF1BQ53T94 588 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 CATSPER4Q7RTX7 472 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 RYBPQ8N488 228 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 ZNF473Q8WTR7 871 aaKnown RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 ANKS1AQ92625 1134 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 FAM167AQ96KS9 214 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 REEP2Q9BRK0 252 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 FAM49AQ9H0Q0 323 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 VPS11Q9H270 941 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 CYP26B1Q9NR63 512 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 SLC12A6Q9UHW9 1150 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 TFR2Q9UP52 801 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 KLRC1P26715 233 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 HSPA9P38646 679 aaKnown RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 BCAR1P56945 870 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 ST13P4Q8IZP2 240 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 TSC22D3Q99576 134 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 UPF3AQ9H1J1 476 aaKnown RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 ECT2Q9H8V3 914 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 PTPRUQ92729 1446 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 PDS5AQ29RF7 1337 aaKnown RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 CNTNAP5Q8WYK1 1306 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 PI4K2BG5E9Z4 385 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 STXBP3O00186 592 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 AGTP01019 485 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 S100BP04271 92 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 FMO5P49326 533 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 KLK7P49862 253 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 SPP2Q13103 211 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 C1orf146Q5VVC0 180 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 CLEC10AQ8IUN9 316 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 KAZALD1Q96I82 304 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 CCDC138Q96M89 665 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 ERGIC2Q96RQ1 377 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 TUFT1Q9NNX1 390 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 PSD3Q9NYI0 1048 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 RBAKQ9NYW8 714 aaPredicted RBP14.62□□□□□ -0.07
RTN4-202ENST00000337526 FHOD1Q9Y613 1164 aa14.62□□□□□ -0.07
RTN4-202ENST00000337526 CFAP69A5D8W1 941 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 SLC16A3O15427 465 aaKnown RBP14.61□□□□□ -0.07
RTN4-202ENST00000337526 KITP10721 976 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 ADRA2BP18089 450 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 STAT4Q14765 748 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 TRIM67Q6ZTA4 783 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 SMYD3Q9H7B4 428 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 TCP11X1B4DZS4 312 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 ECE2O60344 883 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 LSP1P33241 339 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 EPHB1P54762 984 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 NFIXQ14938 502 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 OR2W6PQ8NHA6 318 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 PLAGL2Q9UPG8 496 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 PCDHA10Q9Y5I2 948 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 OVOS2A0A0J9YW53 1432 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 OVOS2Q6IE36 1432 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 RAD51CO43502 376 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 ARSEP51690 589 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 MKRN3Q13064 507 aaKnown RBP14.61□□□□□ -0.07
RTN4-202ENST00000337526 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.61□□□□□ -0.072e-6■■□□□ 11.4
RTN4-202ENST00000337526 LDHDQ86WU2 507 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 ABI1Q8IZP0 508 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 GPD1LQ8N335 351 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 ZIM3Q96PE6 472 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 MTRQ99707 1265 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 HOXC10Q9NYD6 342 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 AGO2Q9UKV8 859 aaKnown RBP14.61□□□□□ -0.07
RTN4-202ENST00000337526 ZHX2Q9Y6X8 837 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 UBE2Q2LH0YL09 131 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 LPXNO60711 386 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 CDH16O75309 829 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 PDHA1P08559 390 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 NOP14P78316 857 aaKnown RBP14.61□□□□□ -0.07
RTN4-202ENST00000337526 KLC3Q6P597 504 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 TRIML2Q8N7C3 387 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 RNF139Q8WU17 664 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms