RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 LGALS16A8MUM7 142 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 MDM2Q00987 491 aaPredicted RBP13.01□□□□□ -0.33
FN1-202ENST00000336916 RHOT1Q8IXI2 618 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 LXNQ9BS40 222 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 A0A087WUV0 522 aaPredicted RBP13.01□□□□□ -0.33
FN1-202ENST00000336916 CEP55Q53EZ4 464 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 LRRC8BQ6P9F7 803 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 TNIP2Q8NFZ5 429 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 BFARQ9NZS9 450 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 TBX3O15119 743 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 SLC16A3O15427 465 aaKnown RBP13.01□□□□□ -0.33
FN1-202ENST00000336916 HSPA4LO95757 839 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 TRIM55Q9BYV6 548 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 CAPN7Q9Y6W3 813 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 CNTRLQ7Z7A1 2325 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 CHRNA3P32297 505 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 HDLBPQ00341 1268 aaKnown RBP13.01□□□□□ -0.33
FN1-202ENST00000336916 AMPD2Q01433 879 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 PIGHQ14442 188 aaPredicted RBP13.01□□□□□ -0.33
FN1-202ENST00000336916 ZNF235Q14590 738 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 RNF180Q86T96 592 aa13.01□□□□□ -0.33
FN1-202ENST00000336916 EIF4A3P38919 411 aaKnown RBP13□□□□□ -0.33
FN1-202ENST00000336916 OSTNP61366 133 aa13□□□□□ -0.33
FN1-202ENST00000336916 KCNB1Q14721 858 aa13□□□□□ -0.33
FN1-202ENST00000336916 PROSER3Q2NL68 480 aa13□□□□□ -0.33
FN1-202ENST00000336916 SPATA2LQ8IUW3 424 aaPredicted RBP13□□□□□ -0.33
FN1-202ENST00000336916 GUF1Q8N442 669 aaKnown RBP13□□□□□ -0.33
FN1-202ENST00000336916 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13□□□□□ -0.33
FN1-202ENST00000336916 OSBP2Q969R2 916 aa13□□□□□ -0.33
FN1-202ENST00000336916 SCHIP1Q9P0W5 487 aaPredicted RBP13□□□□□ -0.33
FN1-202ENST00000336916 GDAQ9Y2T3 454 aa13□□□□□ -0.33
FN1-202ENST00000336916 TADA2AO75478 443 aa13□□□□□ -0.33
FN1-202ENST00000336916 ESRRBO95718 433 aa13□□□□□ -0.33
FN1-202ENST00000336916 CDC27P30260 824 aa13□□□□□ -0.33
FN1-202ENST00000336916 SLC35F6Q8N357 371 aa13□□□□□ -0.33
FN1-202ENST00000336916 SPATA16Q9BXB7 569 aa13□□□□□ -0.33
FN1-202ENST00000336916 RPAP3Q9H6T3 665 aaPredicted RBP13□□□□□ -0.33
FN1-202ENST00000336916 KIF17Q9P2E2 1029 aa13□□□□□ -0.33
FN1-202ENST00000336916 ARHGAP10A1A4S6 786 aa13□□□□□ -0.33
FN1-202ENST00000336916 ROR1Q01973 937 aa13□□□□□ -0.33
FN1-202ENST00000336916 BTBD8Q5XKL5 378 aa13□□□□□ -0.33
FN1-202ENST00000336916 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
FN1-202ENST00000336916 POLR3FQ9H1D9 316 aaPredicted RBP13□□□□□ -0.33
FN1-202ENST00000336916 TMEM60Q9H2L4 133 aa13□□□□□ -0.33
FN1-202ENST00000336916 ARHGAP26Q9UNA1 814 aa13□□□□□ -0.33
FN1-202ENST00000336916 PNPLA4P41247 253 aa13□□□□□ -0.33
FN1-202ENST00000336916 DHX9Q08211 1270 aaKnown RBP13□□□□□ -0.33
FN1-202ENST00000336916 DHX34Q14147 1143 aaKnown RBP13□□□□□ -0.33
FN1-202ENST00000336916 DGKDQ16760 1214 aa13□□□□□ -0.33
FN1-202ENST00000336916 ANGPTL8Q6UXH0 198 aa13□□□□□ -0.33
FN1-202ENST00000336916 ZNF589Q86UQ0 364 aaPredicted RBP13□□□□□ -0.33
FN1-202ENST00000336916 AGO2Q9UKV8 859 aaKnown RBP13□□□□□ -0.33
FN1-202ENST00000336916 APOL1O14791 398 aa13□□□□□ -0.33
FN1-202ENST00000336916 KPNA6O60684 536 aa13□□□□□ -0.33
FN1-202ENST00000336916 SLC2A3P11169 496 aa13□□□□□ -0.33
FN1-202ENST00000336916 AP1B1Q10567 949 aa13□□□□□ -0.33
FN1-202ENST00000336916 NBPF9Q3BBW0 867 aa13□□□□□ -0.33
FN1-202ENST00000336916 ARHGAP15Q53QZ3 475 aa13□□□□□ -0.33
FN1-202ENST00000336916 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
FN1-202ENST00000336916 LOXHD1Q8IVV2 1947 aa13□□□□□ -0.33
FN1-202ENST00000336916 F5H6K3 240 aa13□□□□□ -0.33
FN1-202ENST00000336916 CHUKO15111 745 aa13□□□□□ -0.33
FN1-202ENST00000336916 HOXA2O43364 376 aa13□□□□□ -0.33
FN1-202ENST00000336916 YWHABP31946 246 aaKnown RBP13□□□□□ -0.33
FN1-202ENST00000336916 ATP1A2P50993 1020 aa13□□□□□ -0.33
FN1-202ENST00000336916 RBP5P82980 135 aa13□□□□□ -0.33
FN1-202ENST00000336916 KLRC3Q07444 240 aa13□□□□□ -0.33
FN1-202ENST00000336916 SLC12A1Q13621 1099 aa13□□□□□ -0.33
FN1-202ENST00000336916 CDO1Q16878 200 aa13□□□□□ -0.33
FN1-202ENST00000336916 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
FN1-202ENST00000336916 ATP11CQ8NB49 1132 aa13□□□□□ -0.33
FN1-202ENST00000336916 OSCP1Q8WVF1 389 aa13□□□□□ -0.33
FN1-202ENST00000336916 GRAMD1AQ96CP6 724 aa13□□□□□ -0.33
FN1-202ENST00000336916 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
FN1-202ENST00000336916 NR5A1Q13285 461 aa13□□□□□ -0.33
FN1-202ENST00000336916 SV2CQ496J9 727 aa13□□□□□ -0.33
FN1-202ENST00000336916 ERAP1Q9NZ08 941 aa13□□□□□ -0.33
FN1-202ENST00000336916 CCDC78A2IDD5 438 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 PPP6R3Q5H9R7 873 aaPredicted RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 SCARA5Q6ZMJ2 495 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 CAPN12Q6ZSI9 719 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 MRPL46Q9H2W6 279 aaKnown RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 USP31Q70CQ4 1352 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 ZC3H4Q9UPT8 1303 aaKnown RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 ESRRAP11474 423 aaPredicted RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 HP1BP3Q5SSJ5 553 aaPredicted RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 CNOT8Q9UFF9 292 aaKnown RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
FN1-202ENST00000336916 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 KRT17Q04695 432 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 EPM2AIP1Q7L775 607 aaPredicted RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 HGSO14964 777 aaPredicted RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 EEF1B2P24534 225 aaKnown RBP12.99□□□□□ -0.33
FN1-202ENST00000336916 SGMS1Q86VZ5 419 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 CHST13Q8NET6 341 aa12.99□□□□□ -0.33
FN1-202ENST00000336916 CATSPERBQ9H7T0 1116 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms