RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 TOPAZ1Q8N9V7 1692 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 EVI5O60447 810 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 LUC7L3O95232 432 aaKnown RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RNASE9P60153 205 aaKnown RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 ACCSLQ4AC99 568 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 NUF2Q9BZD4 464 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 FAM96AQ9H5X1 160 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 TRPC7Q9HCX4 862 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 GJB4Q9NTQ9 266 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 WDR35Q9P2L0 1181 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 MRFAP1Q9Y605 127 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 FAM205AQ6ZU69 1335 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 NPTXRO95502 500 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 TCP1P17987 556 aaKnown RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 GCKP35557 465 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RASSF2P50749 326 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 EXOSC10Q01780 885 aaKnown RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 ZNF543Q08ER8 600 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 NFIAQ12857 509 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RBBP5Q15291 538 aaKnown RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 SGO2Q562F6 1265 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 CTAGE3PQ8IX95 158 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 DNAAF3Q8N9W5 541 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RIT2Q99578 217 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RTFDC1Q9BY42 306 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 KLC2Q9H0B6 622 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 ALDH8A1Q9H2A2 487 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 TMX1Q9H3N1 280 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 BARHL2Q9NY43 387 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RNF14Q9UBS8 474 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RWDD2AQ9UIY3 292 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 BCL9LQ86UU0 1499 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 NCAM2O15394 837 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 ACADMP11310 421 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 HARS2P49590 506 aaKnown RBP7.84□□□□□ -1.16
EPHA3-201ENST00000336596 HSD17B4P51659 736 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 GEMIN4P57678 1058 aaKnown RBP7.84□□□□□ -1.16
EPHA3-201ENST00000336596 FBXW4P57775 412 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 APBA1Q02410 837 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 RESTQ13127 1097 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 ZNF235Q14590 738 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 DARS2Q6PI48 645 aaKnown RBP7.84□□□□□ -1.16
EPHA3-201ENST00000336596 UNC13DQ70J99 1090 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 HDXQ7Z353 690 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 LINC00301Q8NCQ3 95 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.84□□□□□ -1.16
EPHA3-201ENST00000336596 FSD1LQ9BXM9 530 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 NLRC4Q9NPP4 1024 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 DNAJC17Q9NVM6 304 aaKnown RBP7.84□□□□□ -1.16
EPHA3-201ENST00000336596 MAD1L1Q9Y6D9 718 aa7.84□□□□□ -1.16
EPHA3-201ENST00000336596 CFAP99D6REC4 459 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 ERCC3P19447 782 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 SDC4P31431 198 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 PPP2R5CQ13362 524 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 NBPF9Q3BBW0 867 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 NECAB2Q7Z6G3 386 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CPLX4Q7Z7G2 160 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 ENOX1Q8TC92 643 aaKnown RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CCDC124Q96CT7 223 aaKnown RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CNOT6LQ96LI5 555 aaKnown RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 VCX3AQ9NNX9 186 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 ANKEF1Q9NU02 776 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 A8MXQ7 604 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 MEIS1O00470 390 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 IFNAR2P48551 515 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 POLR2FP61218 127 aaKnown RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 ARHGEF7Q14155 803 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 PCBP1Q15365 356 aaKnown RBP eCLIP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 TAF1BQ53T94 588 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 TAF2Q6P1X5 1199 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 SH3KBP1Q96B97 665 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CHAMP1Q96JM3 812 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CAPZA3Q96KX2 299 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 PRR12Q9ULL5 1215 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 ZNF148Q9UQR1 794 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 SALL1Q9NSC2 1324 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 ATRNO75882 1429 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CAND2O75155 1236 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 KCNB1Q14721 858 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 WHAMMP3Q1A5X7 153 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 IGDCC4Q8TDY8 1250 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 HSPH1Q92598 858 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 PPP1R13BQ96KQ4 1090 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 LRRC37BQ96QE4 947 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 UBQLN1Q9UMX0 589 aaKnown RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 NCKAP1Q9Y2A7 1128 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 SLC15A5A6NIM6 579 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 PPP1R12AO14974 1030 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 PYGLP06737 847 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CTTNQ14247 550 aaKnown RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 ZNF746Q6NUN9 644 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CCDC149Q6ZUS6 474 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 RAD54LQ92698 747 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 SYNDIG1Q9H7V2 258 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 CBX8Q9HC52 389 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 SLC39A2Q9NP94 309 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 RCOR1Q9UKL0 485 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 GDAQ9Y2T3 454 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 TMX2Q9Y320 296 aa7.83□□□□□ -1.16
EPHA3-201ENST00000336596 AK9Q5TCS8 1911 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms