RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 LUC7L3O95232 432 aaKnown RBP14.74□□□□□ -0.05
SYNE3-201ENST00000334258 PRR16Q569H4 304 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 MIS18BP1Q6P0N0 1132 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 C16orf86Q6ZW13 317 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 PALB2Q86YC2 1186 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 RDH13Q8NBN7 331 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 STK33Q9BYT3 514 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 BCAS3Q9H6U6 928 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 KCNMB3Q9NPA1 279 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 TYW1Q9NV66 732 aaKnown RBP14.74□□□□□ -0.05
SYNE3-201ENST00000334258 ASIC3Q9UHC3 531 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 COG5Q9UP83 839 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 VCAM1P19320 739 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 SLC12A3P55017 1021 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 TTC27Q6P3X3 843 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 INTS8Q75QN2 995 aaKnown RBP14.74□□□□□ -0.05
SYNE3-201ENST00000334258 CATSPER3Q86XQ3 398 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 KSR1Q8IVT5 923 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 ADGRF4Q8IZF3 695 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-201ENST00000334258 ERMNQ8TAM6 284 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 OSBPL1AQ9BXW6 950 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 USP40Q9NVE5 1235 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 NKIRAS1Q9NYS0 192 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 CTNNAL1Q9UBT7 734 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 BCS1LQ9Y276 419 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 PASKQ96RG2 1323 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 A0A1B0GUL6 1792 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 ANKRD62A6NC57 917 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 SPOPO43791 374 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 SMNDC1O75940 238 aaKnown RBP eCLIP14.73□□□□□ -0.05
SYNE3-201ENST00000334258 GH1P01241 217 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 ALADP13716 330 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 HOXD13P35453 343 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 PTGIRP43119 386 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 CYP2J2P51589 502 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 CRY2Q49AN0 593 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 ASPRV1Q53RT3 343 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 NLGN1Q8N2Q7 840 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 RMDN2Q96LZ7 410 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 BHMT2Q9H2M3 363 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 JMJD4Q9H9V9 463 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 RXFP1Q9HBX9 757 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 ARHGEF10LQ9HCE6 1279 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 PITPNM2Q9BZ72 1349 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 DLEC1Q9Y238 1755 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 ANKRD63C9JTQ0 380 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 FTLP02792 175 aaPredicted RBP14.73□□□□□ -0.05
SYNE3-201ENST00000334258 TRIM49P0CI25 452 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 TRIM49CP0CI26 452 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 HSPA6P17066 643 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 ATP5DP30049 168 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 GALNTL6Q49A17 601 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 ZNF746Q6NUN9 644 aaPredicted RBP14.73□□□□□ -0.05
SYNE3-201ENST00000334258 SLC30A5Q8TAD4 765 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 NAF1Q96HR8 494 aaKnown RBP14.73□□□□□ -0.05
SYNE3-201ENST00000334258 ARHGEF3Q9NR81 526 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 NENFQ9UMX5 172 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 PFASO15067 1338 aa14.73□□□□□ -0.05
SYNE3-201ENST00000334258 SETDB1Q15047 1291 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 SEPT14Q6ZU15 432 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 ZC3H3Q8IXZ2 948 aaKnown RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 RAB3IPQ96QF0 476 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 CDC42EP4Q9H3Q1 356 aaKnown RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.72□□□□□ -0.056e-9■■■■■ 134.6
SYNE3-201ENST00000334258 CORO1CQ9ULV4 474 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 SBF2Q86WG5 1849 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 ECEL1O95672 775 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 PDHA1P08559 390 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 PSMC2P35998 433 aaKnown RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 VPS41P49754 854 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 CTTNQ14247 550 aaKnown RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 SHROOM1Q2M3G4 852 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 GNPTABQ3T906 1256 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 HYIQ5T013 277 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 KCTD1Q719H9 257 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 TRIM74Q86UV6 250 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 TRIM73Q86UV7 250 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 SRRM1Q8IYB3 904 aaKnown RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 CERS5Q8N5B7 392 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 POP1Q99575 1024 aaKnown RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 NHSQ6T4R5 1651 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 NCANO14594 1321 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 TCRBV7S2A1N4TA0A589 114 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 MIF4GDA9UHW6 222 aaKnown RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L10C9JJH3 530 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 MYBL1P10243 752 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 COMTP21964 271 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 TNIP1Q15025 636 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 TRIP13Q15645 432 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 THEMIS2Q5TEJ8 643 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 RHOT2Q8IXI1 618 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 MYCT1Q8N699 235 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 FAM210AQ96ND0 272 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 PITPNM3Q9BZ71 974 aa14.72□□□□□ -0.05
SYNE3-201ENST00000334258 ROPN1BQ9BZX4 212 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 ROPN1Q9HAT0 212 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.72□□□□□ -0.05
SYNE3-201ENST00000334258 ROBO3Q96MS0 1386 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 H0Y3Z8 333 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms