RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PANK4Q9NVE7 773 aa22.54■■□□□ 1.2
MRPL40-201ENST00000333130 NLRC5Q86WI3 1866 aa22.54■■□□□ 1.2
MRPL40-201ENST00000333130 A0A1B0GUA9 196 aa22.53■■□□□ 1.2
MRPL40-201ENST00000333130 B4GALT5O43286 388 aa22.53■■□□□ 1.2
MRPL40-201ENST00000333130 GTPBP6O43824 516 aaPredicted RBP22.53■■□□□ 1.2
MRPL40-201ENST00000333130 KINO60870 393 aaKnown RBP22.53■■□□□ 1.2
MRPL40-201ENST00000333130 DGKIO75912 1065 aa22.53■■□□□ 1.2
MRPL40-201ENST00000333130 MAPTP10636 758 aaKnown RBP22.53■■□□□ 1.2
MRPL40-201ENST00000333130 CASP1P29466 404 aa22.53■■□□□ 1.2
MRPL40-201ENST00000333130 BICD1Q96G01 975 aa22.53■■□□□ 1.2
MRPL40-201ENST00000333130 FIZ1Q96SL8 496 aa22.53■■□□□ 1.2
MRPL40-201ENST00000333130 MRPL44Q9H9J2 332 aaKnown RBP22.53■■□□□ 1.2
MRPL40-201ENST00000333130 YBX2Q9Y2T7 364 aaKnown RBP22.53■■□□□ 1.2
MRPL40-201ENST00000333130 PCDHB2Q9Y5E7 798 aa22.53■■□□□ 1.2
MRPL40-201ENST00000333130 RALGAPA2Q2PPJ7 1873 aa22.53■■□□□ 1.2
MRPL40-201ENST00000333130 RBAK-RBAKDNI3L0D1 243 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 ZNF623O75123 536 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 PRR29P0C7W0 189 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 EHHADHQ08426 723 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 DPYDQ12882 1025 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 BTG3Q14201 252 aaPredicted RBP22.52■■□□□ 1.2
MRPL40-201ENST00000333130 DCAF4L1Q3SXM0 396 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 HERC4Q5GLZ8 1057 aaPredicted RBP22.52■■□□□ 1.2
MRPL40-201ENST00000333130 ATF7IP2Q5U623 682 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 STXBP4Q6ZWJ1 553 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 UNC13DQ70J99 1090 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 SFR1Q86XK3 245 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 CMTR2Q8IYT2 770 aaKnown RBP22.52■■□□□ 1.2
MRPL40-201ENST00000333130 BLZF1Q9H2G9 400 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 OLFML3Q9NRN5 406 aa22.52■■□□□ 1.2
MRPL40-201ENST00000333130 PVALEFA0A1B0GWK0 134 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 KLRC4O43908 158 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 MYOGP15173 224 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 COASYQ13057 564 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 ALCAMQ13740 583 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 POSTNQ15063 836 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 GLB1LQ6UWU2 654 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 CRIPAKQ8N1N5 446 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 FIBCD1Q8N539 461 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 GPT2Q8TD30 523 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 HVCN1Q96D96 273 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 UBN1Q9NPG3 1134 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 RWDD3Q9Y3V2 267 aa22.51■■□□□ 1.19
MRPL40-201ENST00000333130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.5■■□□□ 1.19
MRPL40-201ENST00000333130 NPTXRO95502 500 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 SP7Q8TDD2 431 aaPredicted RBP22.5■■□□□ 1.19
MRPL40-201ENST00000333130 CCDC47Q96A33 483 aaKnown RBP22.5■■□□□ 1.19
MRPL40-201ENST00000333130 SAMD11Q96NU1 681 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 MRPL9Q9BYD2 267 aaKnown RBP22.5■■□□□ 1.19
MRPL40-201ENST00000333130 TMEM117Q9H0C3 514 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 ST6GALNAC4Q9H4F1 302 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 PDZD7Q9H5P4 517 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 HOOK1Q9UJC3 728 aaKnown RBP22.5■■□□□ 1.19
MRPL40-201ENST00000333130 TNFSF13BQ9Y275 285 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 TBKBP1A7MCY6 615 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 ITGA4P13612 1032 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 ZNF568Q3ZCX4 644 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 UBXN11Q5T124 520 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 ZPBP2Q6X784 338 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 ZNF598Q86UK7 904 aaKnown RBP22.5■■□□□ 1.19
MRPL40-201ENST00000333130 URGCPQ8TCY9 931 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 ZNF689Q96CS4 500 aaPredicted RBP22.5■■□□□ 1.19
MRPL40-201ENST00000333130 TCHPQ9BT92 498 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 EIF2AQ9BY44 585 aaKnown RBP22.5■■□□□ 1.19
MRPL40-201ENST00000333130 ZNF576Q9H609 170 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 TBX20Q9UMR3 447 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 IPPQ9Y573 584 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 PCDHB13Q9Y5F0 798 aa22.5■■□□□ 1.19
MRPL40-201ENST00000333130 LCHNA4D1U4 455 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 HNRNPDLO14979 420 aaKnown RBP22.49■■□□□ 1.19
MRPL40-201ENST00000333130 GCNT3O95395 438 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 FGFR1P11362 822 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 NMT1P30419 496 aaKnown RBP22.49■■□□□ 1.19
MRPL40-201ENST00000333130 MATR3P43243 847 aaKnown RBP eCLIP22.49■■□□□ 1.19
MRPL40-201ENST00000333130 LIG4P49917 911 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 PNOCQ13519 176 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 PAN2Q504Q3 1202 aaKnown RBP22.49■■□□□ 1.19
MRPL40-201ENST00000333130 TAS1R3Q7RTX0 852 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 LRRC43Q8N309 656 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 SPATA20Q8TB22 786 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 TGS1Q96RS0 853 aaKnown RBP22.49■■□□□ 1.19
MRPL40-201ENST00000333130 ACO2Q99798 780 aaKnown RBP22.49■■□□□ 1.19
MRPL40-201ENST00000333130 RC3H2Q9HBD1 1191 aaKnown RBP22.49■■□□□ 1.19
MRPL40-201ENST00000333130 EXOC7Q9UPT5 735 aa22.49■■□□□ 1.19
MRPL40-201ENST00000333130 TDRD15B5MCY1 1934 aaKnown RBP22.48■■□□□ 1.19
MRPL40-201ENST00000333130 LINC01553A4QN01 128 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 PPP1R37O75864 691 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 MBD3O95983 291 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 ATF7P17544 494 aaPredicted RBP22.48■■□□□ 1.19
MRPL40-201ENST00000333130 GTF2BQ00403 316 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 SPOUT1Q5T280 376 aaKnown RBP22.48■■□□□ 1.19
MRPL40-201ENST00000333130 NT5DC1Q5TFE4 455 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 ZNF720Q7Z2F6 126 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 MRPL10Q7Z7H8 261 aaKnown RBP22.48■■□□□ 1.19
MRPL40-201ENST00000333130 CDR2LQ86X02 465 aaPredicted RBP22.48■■□□□ 1.19
MRPL40-201ENST00000333130 TARS2Q9BW92 718 aaKnown RBP22.48■■□□□ 1.19
MRPL40-201ENST00000333130 STRA6Q9BX79 667 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 RSAD1Q9HA92 442 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 TBC1D7Q9P0N9 293 aa22.48■■□□□ 1.19
MRPL40-201ENST00000333130 KIAA1671Q9BY89 1806 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms