RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 MMP13P45452 471 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 KCNJ1P48048 391 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 JAM2P57087 298 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 SATB1Q01826 763 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 ADCY1Q08828 1119 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 MKRN4PQ13434 485 aaPredicted RBP9.37□□□□□ -0.91
LIMK2-201ENST00000331728 RIPK1Q13546 671 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 DUPD1Q68J44 220 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 USP37Q86T82 979 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 COL23A1Q86Y22 540 aaPredicted RBP9.37□□□□□ -0.91
LIMK2-201ENST00000331728 SLC20A1Q8WUM9 679 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 NUP85Q9BW27 656 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 WNT8AQ9H1J5 351 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 SIX2Q9NPC8 291 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 BATF3Q9NR55 127 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 TAS2R14Q9NYV8 317 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 KLHL14Q9P2G3 628 aa9.37□□□□□ -0.91
LIMK2-201ENST00000331728 IGSF9BQ9UPX0 1349 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 EML1O00423 815 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 MEIS2O14770 477 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 GH2P01242 217 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 VAMP7P51809 220 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 IFI35P80217 286 aaPredicted RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ATP11AP98196 1134 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 BMT2Q1RMZ1 405 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 CBWD6Q4V339 395 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 CBWD3Q5JTY5 395 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 CBWD5Q5RIA9 395 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 AADACL2Q6P093 401 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 PIGWQ7Z7B1 504 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 FBF1Q8TES7 1133 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ATP8B4Q8TF62 1192 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 MAIP1Q8WWC4 291 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 THOC1Q96FV9 657 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ACCSQ96QU6 501 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 PLCD4Q9BRC7 762 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 LRRC4CQ9HCJ2 640 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.36□□□□□ -0.911e-7■■□□□ 12.9
LIMK2-201ENST00000331728 NOP53Q9NZM5 478 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 TRPC6Q9Y210 931 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 LAMB2P55268 1798 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ATP8B3O60423 1300 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 IGKV6D-41A0A0C4DH26 115 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 TGFB1I1O43294 461 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 EDIL3O43854 480 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 HIP1RO75146 1068 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 DLATP10515 647 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 NEFHP12036 1026 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 MFAP3P55082 362 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 EPM2AIP1Q7L775 607 aaPredicted RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ZC3H3Q8IXZ2 948 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ATXN2LQ8WWM7 1075 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 TMEM206Q9H813 350 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ERVK-5Q9HDB9 667 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 TBK1Q9UHD2 729 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 TTC7AQ9ULT0 858 aaPredicted RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 C15orf41Q9Y2V0 281 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 UBE4BO95155 1302 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 GOLGA8IPA6NC78 632 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 GOLGA8JA6NMD2 632 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 PPP1R12AO14974 1030 aaPredicted RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 KIAA0391O15091 583 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 DDX3YO15523 660 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 RTN2O75298 545 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ANP32DO95626 131 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ZBTB48P10074 688 aaPredicted RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 RPL21P46778 160 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 STAT2P52630 851 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 LONRF1Q17RB8 773 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 MEX3CQ5U5Q3 659 aaKnown RBP9.36□□□□□ -0.91
LIMK2-201ENST00000331728 VSIG1Q86XK7 387 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 GRK7Q8WTQ7 553 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 C1orf54Q8WWF1 131 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 ALG3Q92685 438 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 KRT35Q92764 455 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 BICD1Q96G01 975 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 FAXDC2Q96IV6 333 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 LXNQ9BS40 222 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 TXLNGYQ9BZA5 131 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 NAV1Q8NEY1 1877 aa9.36□□□□□ -0.91
LIMK2-201ENST00000331728 TCP11X1B4DZS4 312 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 MAPK4P31152 587 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 BCAS3Q9H6U6 928 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 EBF2Q9HAK2 575 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 MRPL11Q9Y3B7 192 aaKnown RBP9.35□□□□□ -0.91
LIMK2-201ENST00000331728 AFF2P51816 1311 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 MAST2Q6P0Q8 1798 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 CCDC189A1A4V9 331 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 NQO1P15559 274 aaKnown RBP9.35□□□□□ -0.91
LIMK2-201ENST00000331728 COILP38432 576 aaPredicted RBP9.35□□□□□ -0.91
LIMK2-201ENST00000331728 POU5F1Q01860 360 aaKnown RBP9.35□□□□□ -0.91
LIMK2-201ENST00000331728 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 SLC13A5Q86YT5 568 aaPredicted RBP9.35□□□□□ -0.91
LIMK2-201ENST00000331728 GBP7Q8N8V2 638 aaPredicted RBP9.35□□□□□ -0.91
LIMK2-201ENST00000331728 MAB21L3Q8N8X9 362 aa9.35□□□□□ -0.91
LIMK2-201ENST00000331728 XXYLT1Q8NBI6 393 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms