RNA–Protein interactions for RNA: ENST00000330554.4

TPM3P8-201, Transcript of tropomyosin 3 pseudogene 8, humanhuman

BASIC

Gene TPM3P8, Length 643 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P8-201ENST00000330554 IGFBP4P22692 258 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 CTNNB1P35222 781 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 MATR3P43243 847 aaKnown RBP eCLIP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 SYKP43405 635 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 ZNF131P52739 623 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 ASIC1P78348 528 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 RNASELQ05823 741 aaKnown RBP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 E2F4Q16254 413 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 UBXN11Q5T124 520 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 MRPL10Q7Z7H8 261 aaKnown RBP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 ZNF598Q86UK7 904 aaKnown RBP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 TMEM161BQ8NDZ6 487 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 RSPH1Q8WYR4 309 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 MRPS27Q92552 414 aaKnown RBP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 CDX2Q99626 313 aaPredicted RBP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 EIF2AQ9BY44 585 aaKnown RBP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 MRPL9Q9BYD2 267 aaKnown RBP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 MRPL44Q9H9J2 332 aaKnown RBP16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 PANK4Q9NVE7 773 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 SEL1LQ9UBV2 794 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 PARP2Q9UGN5 583 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 IPPQ9Y573 584 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 PCDHB12Q9Y5F1 795 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 SIP14410 1827 aa16.59■□□□□ 0.25
TPM3P8-201ENST00000330554 LOXHD1Q8IVV2 1947 aa16.58■□□□□ 0.25
TPM3P8-201ENST00000330554 LAMA3Q16787 3333 aa16.58■□□□□ 0.25
TPM3P8-201ENST00000330554 TTC3P53804 2025 aa16.58■□□□□ 0.25
TPM3P8-201ENST00000330554 GTPBP6O43824 516 aaPredicted RBP16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 ARHGEF15O94989 841 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 SLFN14P0C7P3 912 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 MAPTP10636 758 aaKnown RBP16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 BMPR1AP36894 532 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 AFMP43652 599 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 DCAF4L1Q3SXM0 396 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 EPC2Q52LR7 807 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 NOMO2Q5JPE7 1267 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 NT5DC1Q5TFE4 455 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 CASD1Q96PB1 797 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 FAM193BQ96PV7 902 aaPredicted RBP16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 C17orf80Q9BSJ5 609 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 TARS2Q9BW92 718 aaKnown RBP16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 PDZD7Q9H5P4 517 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 RSAD1Q9HA92 442 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 TYW1Q9NV66 732 aaKnown RBP16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 KBTBD4Q9NVX7 518 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 KANSL3Q9P2N6 904 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 SERTAD1Q9UHV2 236 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 USP20Q9Y2K6 914 aa16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 MRPL42Q9Y6G3 142 aaKnown RBP16.58■□□□□ 0.24
TPM3P8-201ENST00000330554 RB1P06400 928 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 FOSL2P15408 326 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 NMT1P30419 496 aaKnown RBP16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 NCKAP1LP55160 1127 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 STXBP4Q6ZWJ1 553 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 ZBTB33Q86T24 672 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 SFR1Q86XK3 245 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 LRRC43Q8N309 656 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 MYLIPQ8WY64 445 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 DNAJC19Q96DA6 116 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 IPO9Q96P70 1041 aaKnown RBP16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 ACO2Q99798 780 aaKnown RBP16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 TBC1D7Q9P0N9 293 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 TBX20Q9UMR3 447 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 TNFSF13BQ9Y275 285 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 PCDHB13Q9Y5F0 798 aa16.57■□□□□ 0.24
TPM3P8-201ENST00000330554 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 OFD1O75665 1012 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 ATF7P17544 494 aaPredicted RBP16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 LAG3P18627 525 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 LIG4P49917 911 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 NDUFA8P51970 172 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 GPM6BQ13491 265 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 ZNF568Q3ZCX4 644 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 CLLU1OSQ5K130 101 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 SMG8Q8ND04 991 aaKnown RBP16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 GUCD1Q96NT3 240 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 C7orf25Q9BPX7 421 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 C11orf84Q9BUA3 381 aaPredicted RBP16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 PLVAPQ9BX97 442 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 TRIM9Q9C026 710 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 NXF3Q9H4D5 531 aaKnown RBP16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 RC3H2Q9HBD1 1191 aaKnown RBP16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 RNF19AQ9NV58 838 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 GIT1Q9Y2X7 761 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 HES2Q9Y543 173 aa16.56■□□□□ 0.24
TPM3P8-201ENST00000330554 CUL9Q8IWT3 2517 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 RFXAPO00287 272 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 HNRNPDLO14979 420 aaKnown RBP16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 CLDN3O15551 220 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 TOM1L1O75674 476 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 GCNT3O95395 438 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 AKAP5P24588 427 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 ALDH7A1P49419 539 aaKnown RBP16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 YARSP54577 528 aaKnown RBP16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 PTPROQ16827 1216 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 EEF1DP3Q658K8 133 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 ZPBP2Q6X784 338 aa16.55■□□□□ 0.24
TPM3P8-201ENST00000330554 AGMOQ6ZNB7 445 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms