RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 GAS8O95995 478 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 VIL1P09327 827 aaKnown RBP8.98□□□□□ -0.97
SKA2-201ENST00000330137 OR52Z1P0C646 297 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 BRAFP15056 766 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 CRABP2P29373 138 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 EPS15P42566 896 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 EDRF1Q3B7T1 1238 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 METTL24Q5JXM2 366 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 TBC1D9BQ66K14 1250 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 NRAPQ86VF7 1730 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 MYOCDQ8IZQ8 938 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 C12orf50Q8NA57 414 aaPredicted RBP8.98□□□□□ -0.97
SKA2-201ENST00000330137 ZKSCAN3Q9BRR0 538 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 BTBD10Q9BSF8 475 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 TYW1Q9NV66 732 aaKnown RBP8.98□□□□□ -0.97
SKA2-201ENST00000330137 GGT7Q9UJ14 662 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 WDR46O15213 610 aaKnown RBP8.98□□□□□ -0.97
SKA2-201ENST00000330137 PHKG2P15735 406 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 SPIDRQ14159 915 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 GRM2Q14416 872 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 RRP1BQ14684 758 aaKnown RBP8.98□□□□□ -0.97
SKA2-201ENST00000330137 ZNF571Q7Z3V5 609 aaPredicted RBP8.98□□□□□ -0.97
SKA2-201ENST00000330137 PHLDB2Q86SQ0 1253 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 FAM133AQ8N9E0 248 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 NAT14Q8WUY8 206 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 STMN2Q93045 179 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 DDX27Q96GQ7 796 aaKnown RBP8.98□□□□□ -0.97
SKA2-201ENST00000330137 CCDC77Q9BR77 488 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 PPP1R12CQ9BZL4 782 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 HAO1Q9UJM8 370 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 SH3GLB1Q9Y371 365 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 LRP5O75197 1615 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 UBR2Q8IWV8 1755 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 PDE8BO95263 885 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 ITGA2BP08514 1039 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 LMNB1P20700 586 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 EPHB2P29323 1055 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 RAP1GDS1P52306 607 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 R3HDM1Q15032 1099 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 KHDC1Q4VXA5 237 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 PI16Q6UXB8 463 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 ACAD11Q709F0 780 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 MAEAQ7L5Y9 396 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 HS2ST1Q7LGA3 356 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 ZNF554Q86TJ5 538 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 IFNL2Q8IZJ0 200 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 SLC17A8Q8NDX2 589 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 TTLL11Q8NHH1 800 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 FOXP3Q9BZS1 431 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 CCDC113Q9H0I3 377 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 NT5C3AQ9H0P0 336 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 DBR1Q9UK59 544 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 G3BP2Q9UN86 482 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 SMG5Q9UPR3 1016 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 NR2E3Q9Y5X4 410 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 COL1A1P02452 1464 aaPredicted RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 PFASO15067 1338 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 SPATA31A5Q5VU36 1347 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 SPATA31A7Q8IWB4 1347 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 GTPBP10A4D1E9 387 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 FAM47DPA6NHR8 397 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 DNAJC6O75061 913 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 ENTPD5O75356 428 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 SLC5A1P13866 664 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 VCAM1P19320 739 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 ITIH2P19823 946 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 TARSP26639 723 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 MAN1A1P33908 653 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 RPL21P46778 160 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 SCNN1BP51168 640 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 ARHGAP4P98171 946 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 DSG1Q02413 1049 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 CALCOCO2Q13137 446 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 SLC39A6Q13433 755 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 STAT4Q14765 748 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 KRT72Q14CN4 511 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 RASA2Q15283 850 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 RCN1Q15293 331 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 FRMD5Q7Z6J6 570 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 CCNJLQ8IV13 435 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 LARGE2Q8N3Y3 721 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 UBL4BQ8N7F7 174 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 SPATA5Q8NB90 893 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 C10orf82Q8WW14 230 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 DGCR14Q96DF8 476 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 MXD3Q9BW11 206 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 BRIP1Q9BX63 1249 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 BHMT2Q9H2M3 363 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 SSU72Q9NP77 194 aaKnown RBP8.97□□□□□ -0.97
SKA2-201ENST00000330137 CYLDQ9NQC7 956 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 SNX24Q9Y343 169 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 RGPD5Q99666 1765 aa8.97□□□□□ -0.97
SKA2-201ENST00000330137 CAPN9O14815 690 aa8.96□□□□□ -0.97
SKA2-201ENST00000330137 MAGEC1O60732 1142 aa8.96□□□□□ -0.97
SKA2-201ENST00000330137 EDF1O60869 148 aaKnown RBP8.96□□□□□ -0.97
SKA2-201ENST00000330137 CSDE1O75534 798 aaKnown RBP8.96□□□□□ -0.97
SKA2-201ENST00000330137 UPP2O95045 317 aa8.96□□□□□ -0.97
SKA2-201ENST00000330137 ASMTLO95671 621 aa8.96□□□□□ -0.97
SKA2-201ENST00000330137 TTC4O95801 387 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms