RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SNX24Q9Y343 169 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 KIAA0391O15091 583 aaKnown RBP16.56■□□□□ 0.24
BRCC3-201ENST00000330045 P4HA2O15460 535 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 HSPA6P17066 643 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 PMS2P54278 862 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 PPP3CAQ08209 521 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 TCEAL1Q15170 157 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 CIAPIN1Q6FI81 312 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
BRCC3-201ENST00000330045 HOOK3Q86VS8 718 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 KRT35Q92764 455 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 MXRA8Q9BRK3 442 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 CNOT10Q9H9A5 744 aaKnown RBP16.56■□□□□ 0.24
BRCC3-201ENST00000330045 TISP43B9A030 160 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 PHF2O75151 1096 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 CAND2O75155 1236 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 NUDT17P0C025 328 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 GCLMP48507 274 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 CDR1P51861 262 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 QPCTQ16769 361 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 KCNV1Q6PIU1 500 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 C18orf8Q96DM3 657 aa16.56■□□□□ 0.24
BRCC3-201ENST00000330045 PABPC3Q9H361 631 aaKnown RBP16.56■□□□□ 0.24
BRCC3-201ENST00000330045 TMEM110-MUSTN1A8MSY1 372 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 RTN2O75298 545 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 CHRNA3P32297 505 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 USP8P40818 1118 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 ALCAMQ13740 583 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 EPC2Q52LR7 807 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 ZDHHC24Q6UX98 284 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 MIER3Q7Z3K6 550 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 FBXO25Q8TCJ0 367 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 JDP2Q8WYK2 163 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 ACCSQ96QU6 501 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 ZSWIM1Q9BR11 485 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 CBWD1Q9BRT8 395 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 EPB41L4BQ9H329 900 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 TMOD2Q9NZR1 351 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 C5orf60A6NFR6 353 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 SHBGP04278 402 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 MAPTP10636 758 aaKnown RBP16.55■□□□□ 0.24
BRCC3-201ENST00000330045 PTGIRP43119 386 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 ACTN3Q08043 901 aaPredicted RBP16.55■□□□□ 0.24
BRCC3-201ENST00000330045 DRP2Q13474 957 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 ZNF746Q6NUN9 644 aaPredicted RBP16.55■□□□□ 0.24
BRCC3-201ENST00000330045 CCDC121Q6ZUS5 278 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 ARMC9Q7Z3E5 817 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 LDHDQ86WU2 507 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 PRELID2Q8N945 189 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 RPS6KC1Q96S38 1066 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 VCPKMTQ9H867 229 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 MYOZ2Q9NPC6 264 aa16.55■□□□□ 0.24
BRCC3-201ENST00000330045 P4HBP07237 508 aaKnown RBP16.54■□□□□ 0.24
BRCC3-201ENST00000330045 COMTP21964 271 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 MARCKSL1P49006 195 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 BYSLQ13895 437 aaKnown RBP16.54■□□□□ 0.24
BRCC3-201ENST00000330045 MESDQ14696 234 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 ZYXQ15942 572 aaKnown RBP16.54■□□□□ 0.24
BRCC3-201ENST00000330045 DENND2CQ68D51 928 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 C12orf56Q8IXR9 622 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 XXYLT1Q8NBI6 393 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 AGBL3Q8NEM8 1001 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 TMEM174Q8WUU8 243 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 FAM151AQ8WW52 585 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 SEC16BQ96JE7 1060 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 CABS1Q96KC9 395 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 PKD2L1Q9P0L9 805 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 PCYOX1Q9UHG3 505 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 ZBTB21Q9ULJ3 1066 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 GJA3Q9Y6H8 435 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 PODXLO00592 558 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 SGPL1O95470 568 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 ITGB5P18084 799 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 CTNNA2P26232 953 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 C1orf220Q5T0J3 134 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 SEL1L2Q5TEA6 688 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 RNF25Q96BH1 459 aaPredicted RBP16.54■□□□□ 0.24
BRCC3-201ENST00000330045 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
BRCC3-201ENST00000330045 GRHL1Q9NZI5 618 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 HSPBP1Q9NZL4 362 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 PNMA2Q9UL42 364 aa16.54■□□□□ 0.24
BRCC3-201ENST00000330045 BACH1O14867 736 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 GGPS1O95749 300 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 PEX5P50542 639 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 PLCB4Q15147 1175 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 MDM1Q8TC05 714 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 KAT5Q92993 513 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 TATDN2Q93075 761 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 ZBED3Q96IU2 234 aaPredicted RBP16.53■□□□□ 0.24
BRCC3-201ENST00000330045 PCDHB18PQ96TA0 734 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 WNT8AQ9H1J5 351 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 CHORDC1Q9UHD1 332 aaPredicted RBP16.53■□□□□ 0.24
BRCC3-201ENST00000330045 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 CCDC169A6NNP5 214 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 PLA2G6O60733 806 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 PLS3P13797 630 aa16.53■□□□□ 0.24
BRCC3-201ENST00000330045 GBP1P32455 592 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms