RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TNIP1Q15025 636 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 SETDB1Q15047 1291 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 RHBDF2Q6PJF5 856 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 ARHGEF18Q6ZSZ5 1173 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 COA7Q96BR5 231 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 BORCS6Q96GS4 357 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 POP1Q99575 1024 aaKnown RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 ZCWPW1Q9H0M4 648 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 ZHX3Q9H4I2 956 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 PRDM11Q9NQV5 511 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 SNED1Q8TER0 1413 aa13.71□□□□□ -0.22
CCDC60-201ENST00000327554 ANKRD62A6NC57 917 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 MOGSQ13724 837 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 C11orf63Q6NUN7 778 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 CCDC105Q8IYK2 499 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 B4GALNT2Q8NHY0 566 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 UBA5Q9GZZ9 404 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 VCXQ9H320 206 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 DDX25Q9UHL0 483 aaKnown RBP13.7□□□□□ -0.22
CCDC60-201ENST00000327554 LGALS13Q9UHV8 139 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 STARD13Q9Y3M8 1113 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 ASTN1O14525 1302 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 SMAPO00193 183 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 PDXKO00764 312 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 TRAFD1O14545 582 aaPredicted RBP13.7□□□□□ -0.22
CCDC60-201ENST00000327554 NVLO15381 856 aaKnown RBP13.7□□□□□ -0.22
CCDC60-201ENST00000327554 ECE2O60344 883 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 TCEA3O75764 348 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 POTEJP0CG39 1038 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 TNNI2P48788 182 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 SLC12A3P55017 1021 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 WDR4P57081 412 aaKnown RBP13.7□□□□□ -0.22
CCDC60-201ENST00000327554 DRAP1Q14919 205 aaPredicted RBP13.7□□□□□ -0.22
CCDC60-201ENST00000327554 MUM1Q2TAK8 710 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 UBL4BQ8N7F7 174 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 LRRC37BQ96QE4 947 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 STK33Q9BYT3 514 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 METTL14Q9HCE5 456 aaKnown RBP13.7□□□□□ -0.22
CCDC60-201ENST00000327554 PCDHA12Q9UN75 941 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 RPL26L1Q9UNX3 145 aaKnown RBP13.7□□□□□ -0.22
CCDC60-201ENST00000327554 CDK5RAP2Q96SN8 1893 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 FRMPD4Q14CM0 1322 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 SPATA31A1Q5TZJ5 1347 aa13.7□□□□□ -0.22
CCDC60-201ENST00000327554 WNK3Q9BYP7 1800 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 C10orf71Q711Q0 1435 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 CALUO43852 315 aaPredicted RBP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 TTC4O95801 387 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 NR3C1P04150 777 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 KRT18P05783 430 aaKnown RBP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 PYGLP06737 847 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 CALCOCO2Q13137 446 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 CUL3Q13618 768 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 TMEM63BQ5T3F8 832 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 BICD1Q96G01 975 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 MXD3Q9BW11 206 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 RIOX1Q9H6W3 641 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 TLE6Q9H808 572 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 DCLRE1BQ9H816 532 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 NKIRAS1Q9NYS0 192 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 MINPP1Q9UNW1 487 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 NIP7Q9Y221 180 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 LRCH1Q9Y2L9 728 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 DDX60LQ5H9U9 1706 aaKnown RBP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 MAPK13O15264 365 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 MAGEB2O15479 319 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 PYGMP11217 842 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 POLE2P56282 527 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 ADCY1Q08828 1119 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 PARP10Q53GL7 1025 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 SEL1L2Q5TEA6 688 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 PPP1R21Q6ZMI0 780 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 ARHGAP22Q7Z5H3 698 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 SFR1Q86XK3 245 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 SLC13A5Q86YT5 568 aaPredicted RBP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 RHOT2Q8IXI1 618 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 SRRM1Q8IYB3 904 aaKnown RBP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 C12orf50Q8NA57 414 aaPredicted RBP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 DHX36Q9H2U1 1008 aaKnown RBP13.69□□□□□ -0.22
CCDC60-201ENST00000327554 WHRNQ9P202 907 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 CTTNBP2NLQ9P2B4 639 aa13.69□□□□□ -0.22
CCDC60-201ENST00000327554 hCG_1984214I3L0E3 225 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 CBX6O95503 412 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 CHRNB2P17787 502 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 VHLP40337 213 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 GIT2Q14161 759 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 KYNUQ16719 465 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 ARMC3Q5W041 872 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 ZNF449Q6P9G9 518 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms