RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 MAP4K3Q8IVH8 894 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 DEPDC1BQ8WUY9 529 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 RPS6KC1Q96S38 1066 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 BAZ2AQ9UIF9 1905 aaKnown RBP7.62□□□□□ -1.19
CSTF3-201ENST00000323959 TNFRSF10BO14763 440 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 TLX3O43711 291 aaPredicted RBP7.62□□□□□ -1.19
CSTF3-201ENST00000323959 RFPL2O75678 378 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 URODP06132 367 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 APOL6Q9BWW8 343 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 MLXIPQ9HAP2 919 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 ZNF334Q9HCZ1 680 aaPredicted RBP7.62□□□□□ -1.19
CSTF3-201ENST00000323959 GPRC5CQ9NQ84 441 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 AVENQ9NQS1 362 aaPredicted RBP7.62□□□□□ -1.19
CSTF3-201ENST00000323959 PCDH15Q96QU1 1955 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 ASXL3Q9C0F0 2248 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 GRIK4Q16099 956 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 POTEDQ86YR6 584 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 NAXDQ8IW45 347 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 DCAF4Q8WV16 495 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 TRMT61BQ9BVS5 477 aaKnown RBP7.61□□□□□ -1.19
CSTF3-201ENST00000323959 ISY1Q9ULR0 285 aaKnown RBP7.61□□□□□ -1.19
CSTF3-201ENST00000323959 SLC6A14Q9UN76 642 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 NOP56O00567 594 aaKnown RBP7.61□□□□□ -1.19
CSTF3-201ENST00000323959 XYLBO75191 536 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 UBA1P22314 1058 aaKnown RBP7.61□□□□□ -1.19
CSTF3-201ENST00000323959 ANAPC15P60006 121 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 SPDYCQ5MJ68 293 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 CASC1Q6TDU7 716 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 RTL10Q7L3V2 364 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 NPAS3Q8IXF0 933 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 KCNB2Q92953 911 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 MOCOSQ96EN8 888 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 GPATCH3Q96I76 525 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 MBOAT7Q96N66 472 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 ZNF287Q9HBT7 754 aa7.61□□□□□ -1.19
CSTF3-201ENST00000323959 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.61□□□□□ -1.19
CSTF3-201ENST00000323959 ARPP21Q9UBL0 812 aaPredicted RBP7.61□□□□□ -1.19
CSTF3-201ENST00000323959 PLEKHB1Q9UF11 243 aaPredicted RBP7.61□□□□□ -1.19
CSTF3-201ENST00000323959 PATE3B3GLJ2 98 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 HIP1O00291 1037 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 SUV39H1O43463 412 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 RPS6KA5O75582 802 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 SDSP20132 328 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 Q6ZS52 159 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 SLCO6A1Q86UG4 719 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 SYT12Q8IV01 421 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 CLASRPQ8N2M8 674 aaKnown RBP7.6□□□□□ -1.19
CSTF3-201ENST00000323959 SDR42E1Q8WUS8 393 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 TNPO1Q92973 898 aaKnown RBP7.6□□□□□ -1.19
CSTF3-201ENST00000323959 PCDHA2Q9Y5H9 948 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 SURF6O75683 361 aaKnown RBP7.6□□□□□ -1.19
CSTF3-201ENST00000323959 APBB3O95704 486 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 KRT76Q01546 638 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 CLLU1OSQ5K130 101 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 SYDE2Q5VT97 1194 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 SKAP1Q86WV1 359 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 RALGPS2Q86X27 583 aaPredicted RBP7.6□□□□□ -1.19
CSTF3-201ENST00000323959 ECHDC2Q86YB7 292 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 TMEM176AQ96HP8 235 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 VN1R3Q9BXE9 311 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 PLA2G2FQ9BZM2 168 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 PTPRQQ9UMZ3 2332 aa7.6□□□□□ -1.19
CSTF3-201ENST00000323959 ATP5JP18859 108 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 CCNE1P24864 410 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 RNASELQ05823 741 aaKnown RBP7.59□□□□□ -1.19
CSTF3-201ENST00000323959 G3BP1Q13283 466 aaKnown RBP eCLIP7.59□□□□□ -1.19
CSTF3-201ENST00000323959 USH1GQ495M9 461 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 SYTL5Q8TDW5 730 aaPredicted RBP7.59□□□□□ -1.19
CSTF3-201ENST00000323959 CDC6Q99741 560 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 TMEM175Q9BSA9 504 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 ECHDC1Q9NTX5 307 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 EXOC6BQ9Y2D4 811 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 TEX28O15482 410 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 REC8O95072 547 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 SOD2P04179 222 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 GALTP07902 379 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 ACTN2P35609 894 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 SNAP25P60880 206 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 RTP5Q14D33 572 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 SBK1Q52WX2 424 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 METTL7BQ6UX53 244 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 GRASPQ7Z6J2 395 aaPredicted RBP7.59□□□□□ -1.19
CSTF3-201ENST00000323959 MCF2L2Q86YR7 1114 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 CSGALNACT1Q8TDX6 532 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 PIGKQ92643 395 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 OSBP2Q969R2 916 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 CEP95Q96GE4 821 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 GAD1Q99259 594 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 C22orf23Q9BZE7 217 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 STARD5Q9NSY2 213 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 FNIP2Q9P278 1114 aa7.59□□□□□ -1.19
CSTF3-201ENST00000323959 SMIM35A0A1B0GVV1 85 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 MYF5P13349 255 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 IBSPP21815 317 aaPredicted RBP7.59□□□□□ -1.2
CSTF3-201ENST00000323959 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.2
CSTF3-201ENST00000323959 CCINQ13939 588 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 NEDD9Q14511 834 aa7.59□□□□□ -1.2
CSTF3-201ENST00000323959 TTF1Q15361 905 aaPredicted RBP7.59□□□□□ -1.2
CSTF3-201ENST00000323959 SMAD1Q15797 465 aaKnown RBP7.59□□□□□ -1.2
CSTF3-201ENST00000323959 DUOXA1Q1HG43 343 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms