RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 FBXL18Q96ME1 805 aa13.73□□□□□ -0.21
TPM3-204ENST00000323144 GAD1Q99259 594 aa13.73□□□□□ -0.21
TPM3-204ENST00000323144 KIF2CQ99661 725 aa13.73□□□□□ -0.21
TPM3-204ENST00000323144 HERC2P3Q9BVR0 1158 aa13.73□□□□□ -0.21
TPM3-204ENST00000323144 ANKEF1Q9NU02 776 aa13.73□□□□□ -0.21
TPM3-204ENST00000323144 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 LRRIQ4A6NIV6 560 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 C2CD2LO14523 706 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 NRP1O14786 923 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 DGAT1O75907 488 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 NPTXRO95502 500 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 OR52Z1P0C646 297 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 ITGA4P13612 1032 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 HOXB8P17481 243 aaPredicted RBP13.72□□□□□ -0.21
TPM3-204ENST00000323144 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
TPM3-204ENST00000323144 NHLH1Q02575 133 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 TFDP1Q14186 410 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 MXD4Q14582 209 aaPredicted RBP13.72□□□□□ -0.21
TPM3-204ENST00000323144 TPRNQ4KMQ1 711 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 KIAA1841Q6NSI8 718 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 EXOC8Q8IYI6 725 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 PRSS33Q8NF86 280 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 ASIC4Q96FT7 647 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 C8orf76Q96K31 380 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 TMEM175Q9BSA9 504 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 CSRNP2Q9H175 543 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 ADAM7Q9H2U9 754 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 DZANK1Q9NVP4 752 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 MIOSQ9NXC5 875 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 IRAK3Q9Y616 596 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 MYH11P35749 1972 aa13.72□□□□□ -0.21
TPM3-204ENST00000323144 INPPL1O15357 1258 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 PDGFBP01127 241 aaPredicted RBP13.71□□□□□ -0.21
TPM3-204ENST00000323144 CNPP09543 421 aaKnown RBP13.71□□□□□ -0.21
TPM3-204ENST00000323144 AKAP5P24588 427 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 DSC1Q08554 894 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 C8orf34Q49A92 452 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 CDCA2Q69YH5 1023 aaPredicted RBP13.71□□□□□ -0.21
TPM3-204ENST00000323144 TMC5Q6UXY8 1006 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 CATSPER3Q86XQ3 398 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 RABGGTAQ92696 567 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 CCDC51Q96ER9 411 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 B3GALT6Q96L58 329 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 KIFC3Q9BVG8 833 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 LIMCH1Q9UPQ0 1083 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 USP20Q9Y2K6 914 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 DOCK8Q8NF50 2099 aa13.71□□□□□ -0.21
TPM3-204ENST00000323144 ASAP2O43150 1006 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 URODP06132 367 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 ASGR2P07307 311 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 MYBP10242 640 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 AXLP30530 894 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 OR1G1P47890 313 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 CLCN4P51793 760 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 ITIH3Q06033 890 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 SIGLEC14Q08ET2 396 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 ZNF174Q15697 407 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 TTC38Q5R3I4 469 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 CES5AQ6NT32 575 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 TAS1R1Q7RTX1 841 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
TPM3-204ENST00000323144 TDRD5Q8NAT2 981 aaKnown RBP13.7□□□□□ -0.22
TPM3-204ENST00000323144 KLHL5Q96PQ7 755 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 FAM193BQ96PV7 902 aaPredicted RBP13.7□□□□□ -0.22
TPM3-204ENST00000323144 NFKBIZQ9BYH8 718 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
TPM3-204ENST00000323144 CXCL16Q9H2A7 254 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 SFXN1Q9H9B4 322 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 TUFT1Q9NNX1 390 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
TPM3-204ENST00000323144 COL4A3Q01955 1670 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 LILRB3O75022 631 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 BRD1O95696 1058 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 EFEMP2O95967 443 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 SOD2P04179 222 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 MTHFRP42898 656 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 SAFBQ15424 915 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPM3-204ENST00000323144 ECM1Q16610 540 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 IER5LQ5T953 404 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 SLC27A1Q6PCB7 646 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 ZBTB33Q86T24 672 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 CABP7Q86V35 215 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 KREMEN2Q8NCW0 462 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 GSTCDQ8NEC7 633 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 PBXIP1Q96AQ6 731 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 NECTIN4Q96NY8 510 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 PAAF1Q9BRP4 392 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 PDZD7Q9H5P4 517 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 DBR1Q9UK59 544 aaKnown RBP13.69□□□□□ -0.22
TPM3-204ENST00000323144 FAN1Q9Y2M0 1017 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 NR2E1Q9Y466 385 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 ZMYM2Q9UBW7 1377 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 TSC2P49815 1807 aa13.69□□□□□ -0.22
TPM3-204ENST00000323144 CITO14578 2027 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms