RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 TBK1Q9UHD2 729 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 AMFRQ9UKV5 643 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 DAAM1Q9Y4D1 1078 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 PLIN4Q96Q06 1357 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 ASTN1O14525 1302 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 TCP11X1B4DZS4 312 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 GCNT3O95395 438 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 PAEPP09466 180 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 GIT2Q14161 759 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 DENND2CQ68D51 928 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 CCDC26Q8TAB7 109 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 FLOT1O75955 427 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 RARAP10276 462 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 SLC12A3P55017 1021 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 SNX1Q13596 522 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 DUPD1Q68J44 220 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 TRPM8Q7Z2W7 1104 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 SLFN11Q7Z7L1 901 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 RASGEF1CQ8N431 466 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 NEDD1Q8NHV4 660 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 FAM84AQ96KN4 292 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 CEP63Q96MT8 703 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 ERP44Q9BS26 406 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 RIOX1Q9H6W3 641 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 DNAJC18Q9H819 358 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
SEC24A-201ENST00000322887 GRHL1Q9NZI5 618 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 SLC12A4Q9UP95 1085 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 UNCXA6NJT0 531 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 MPHOSPH10O00566 681 aaKnown RBP13.11□□□□□ -0.31
SEC24A-201ENST00000322887 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
SEC24A-201ENST00000322887 DNAJC8O75937 253 aaPredicted RBP13.11□□□□□ -0.31
SEC24A-201ENST00000322887 NR3C1P04150 777 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 SHMT1P34896 483 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 VPS41P49754 854 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 CYP2J2P51589 502 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 NCALDP61601 193 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 PSMD2Q13200 908 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 MPP2Q14168 576 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 PDIA5Q14554 519 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
SEC24A-201ENST00000322887 C1orf131Q8NDD1 294 aaKnown RBP13.11□□□□□ -0.31
SEC24A-201ENST00000322887 NEK9Q8TD19 979 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 RMDN2Q96LZ7 410 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 NUCKS1Q9H1E3 243 aaKnown RBP13.11□□□□□ -0.31
SEC24A-201ENST00000322887 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 ZNF112Q9UJU3 913 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 ENO4A6NNW6 628 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 CHMP2AO43633 222 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 RTN2O75298 545 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 MMP13P45452 471 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 JAM2P57087 298 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 DRP2Q13474 957 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 MTMR3Q13615 1198 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 ZSWIM2Q8NEG5 633 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 KAT5Q92993 513 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
SEC24A-201ENST00000322887 GGA2Q9UJY4 613 aa13.11□□□□□ -0.31
SEC24A-201ENST00000322887 SSC5DA1L4H1 1573 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 KIF3CO14782 793 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 KNOP1Q1ED39 458 aaKnown RBP13.1□□□□□ -0.31
SEC24A-201ENST00000322887 USH1GQ495M9 461 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 KIAA1755Q5JYT7 1200 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 FAM182AQ5T1J6 154 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 NBPF12Q5TAG4 269 aaPredicted RBP13.1□□□□□ -0.31
SEC24A-201ENST00000322887 PIGWQ7Z7B1 504 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 PRELID2Q8N945 189 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 SH2D3AQ9BRG2 576 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
SEC24A-201ENST00000322887 PSTPIP2Q9H939 334 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.1□□□□□ -0.31
SEC24A-201ENST00000322887 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 MAP3K13O43283 966 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 HOXA13P31271 388 aaPredicted RBP13.1□□□□□ -0.31
SEC24A-201ENST00000322887 MRPL12P52815 198 aaKnown RBP13.1□□□□□ -0.31
SEC24A-201ENST00000322887 PTENP60484 403 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 UBXN2AP68543 259 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 EXOC3L1Q86VI1 746 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 SPDL1Q96EA4 605 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 CALR3Q96L12 384 aaKnown RBP13.1□□□□□ -0.31
SEC24A-201ENST00000322887 ZNF341Q9BYN7 854 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 ATP6V0A4Q9HBG4 840 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 DNAJC12Q9UKB3 198 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 NENFQ9UMX5 172 aa13.1□□□□□ -0.31
SEC24A-201ENST00000322887 ADM5C9JUS6 153 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 CCDC188H7C350 402 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 POTEJP0CG39 1038 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 CHKAP35790 457 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 NOVP48745 357 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 FKBP1BP68106 108 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 AUHQ13825 339 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms