RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 BTN3A3O00478 584 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 PMLP29590 882 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 NLGN1Q8N2Q7 840 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 KCTD6Q8NC69 237 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 CCT7Q99832 543 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 EURLQ9NYK6 297 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SRGAP2CP0DJJ0 459 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 CHERPQ8IWX8 916 aaKnown RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 PLCL2Q9UPR0 1127 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 NLRP1Q9C000 1473 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 PCP4L1A6NKN8 68 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 TCF3P15923 654 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 TBXAS1P24557 533 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 THOC5Q13769 683 aaKnown RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 KLHL38Q2WGJ6 581 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 NAIF1Q69YI7 327 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 TRIM72Q6ZMU5 477 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 GCNAQ96QF7 691 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 FAM213AQ9BRX8 229 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 ZNF804BA4D1E1 1349 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 USP17L12C9JPN9 530 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 USP17L21D6R901 530 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 DR1Q01658 176 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 SPIRE1Q08AE8 756 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 GET4Q7L5D6 327 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 ENOSF1Q7L5Y1 443 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 TAF8Q7Z7C8 310 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 MYBL1P10243 752 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 IFNAR1P17181 557 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 PTK2BQ14289 1009 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 SCYL2Q6P3W7 929 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 WDR36Q8NI36 951 aaKnown RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 GRAMD1AQ96CP6 724 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 ERVV-1B6SEH8 477 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 DDX39AO00148 427 aaKnown RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 SLC20A2Q08357 652 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 USF2Q15853 346 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 KRT78Q8N1N4 520 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 ZNF577Q9BSK1 485 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 USP44Q9H0E7 712 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 CHD1O14646 1710 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 GJA3Q9Y6H8 435 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 TMEM2Q9UHN6 1383 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 IFRD2Q12894 506 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 POTEAQ6S8J7 498 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 GADD45BO75293 160 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 MT-ND3P03897 115 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 TRIM25Q14258 630 aaKnown RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 TMEM154Q6P9G4 183 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 DNAAF3Q8N9W5 541 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 ASPSCR1Q9BZE9 553 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 BHMT2Q9H2M3 363 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 SRPRBQ9Y5M8 271 aaKnown RBP10.28□□□□□ -0.76
COL12A1-201ENST00000322507 ITKQ08881 620 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 SARM1Q6SZW1 724 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 RFX6Q8HWS3 928 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 PEX5LQ8IYB4 626 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 MCPH1Q8NEM0 835 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 DPF3Q92784 378 aa10.28□□□□□ -0.76
COL12A1-201ENST00000322507 KIAA1210Q9ULL0 1709 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 PSMC3P17980 439 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 MXI1P50539 228 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 MYBPC2Q14324 1141 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 C6orf10Q5SRN2 563 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 RASSF3Q86WH2 238 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 OTUB1Q96FW1 271 aaPredicted RBP10.27□□□□□ -0.76
COL12A1-201ENST00000322507 EHD1Q9H4M9 534 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 CHRAC1Q9NRG0 131 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 MFN2O95140 757 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 PURAQ00577 322 aaKnown RBP10.27□□□□□ -0.76
COL12A1-201ENST00000322507 ADCK5Q3MIX3 580 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 SPATA21Q7Z572 469 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 SULF1Q8IWU6 871 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 CCDC134Q9H6E4 229 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 VCPKMTQ9H867 229 aa10.27□□□□□ -0.76
COL12A1-201ENST00000322507 KPNA7A9QM74 516 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 NFIBO00712 420 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 MMP1P03956 469 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 EIF2S3LQ2VIR3 472 aaKnown RBP10.27□□□□□ -0.77
COL12A1-201ENST00000322507 DGKKQ5KSL6 1271 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 VSTM4Q8IW00 320 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 SAC3D1A6NKF1 404 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 PSAPP07602 524 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 LRMPQ12912 555 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 TMTC4Q5T4D3 741 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 MINDY2Q8NBR6 621 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 ITFG2Q969R8 447 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 RABL2AQ9UBK7 228 aaPredicted RBP10.27□□□□□ -0.77
COL12A1-201ENST00000322507 MAGEA2P43356 314 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 SYT2Q8N9I0 419 aaPredicted RBP10.27□□□□□ -0.77
COL12A1-201ENST00000322507 GPBP1L1Q9HC44 474 aaPredicted RBP10.27□□□□□ -0.77
COL12A1-201ENST00000322507 ABCA8O94911 1581 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 UGGT1Q9NYU2 1555 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 OSBPP22059 807 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 TNFAIP2Q03169 654 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 APOA5Q6Q788 366 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 MYO3BQ8WXR4 1341 aa10.27□□□□□ -0.77
COL12A1-201ENST00000322507 PRPF3O43395 683 aaKnown RBP10.27□□□□□ -0.77
COL12A1-201ENST00000322507 NPR2P20594 1047 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms