RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ZBTB41Q5SVQ8 909 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 SPATA1Q5VX52 437 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 CEP120Q8N960 986 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 GTPBP4Q9BZE4 634 aaKnown RBP16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 HSD3B7Q9H2F3 369 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 TMEM39AQ9NV64 488 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 PRMT7Q9NVM4 692 aaPredicted RBP16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 UBE4BO95155 1302 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 PPP1R2P41236 205 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 ACOT2P49753 483 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 LRRC63Q05C16 580 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 MBTPS1Q14703 1052 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 LRRC8DQ7L1W4 858 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 ANKRD33Q7Z3H0 272 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 SRGAP1Q7Z6B7 1085 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 ACO2Q99798 780 aaKnown RBP16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 BPIFA3Q9BQP9 254 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 NFKBIZQ9BYH8 718 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 HSPBP1Q9NZL4 362 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 KCNG1Q9UIX4 513 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 ST3GAL5Q9UNP4 418 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 PES1O00541 588 aaKnown RBP16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 CLDN3O15551 220 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 EXOC3O60645 756 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 CDK11BP21127 795 aaKnown RBP16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 LPIN1Q14693 890 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 DEFB128Q7Z7B8 93 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 THNSL1Q8IYQ7 743 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 FAM213AQ9BRX8 229 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 MSTO1Q9BUK6 570 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 TRAF3IP3Q9Y228 551 aa16.84■□□□□ 0.29
PDLIM5-202ENST00000318007 SMTNL1A8MU46 457 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 AKAP3O75969 853 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 CLTBP09497 229 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 FBXO47Q5MNV8 452 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 LRRC55Q6ZSA7 311 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 HVCN1Q96D96 273 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 FAM84AQ96KN4 292 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 EIF2AQ9BY44 585 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 PDZD7Q9H5P4 517 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 MMRN2Q9H8L6 949 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 RNF19AQ9NV58 838 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 PADI3Q9ULW8 664 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 HES2Q9Y543 173 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 CNTNAP2Q9UHC6 1331 aa16.83■□□□□ 0.28
PDLIM5-202ENST00000318007 IKBKBO14920 756 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 ITGB8P26012 769 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 HOXA11P31270 313 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 TNFSF9P41273 254 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 CDC42EP1Q00587 391 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 POU5F1BQ06416 359 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 PAK2Q13177 524 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 CCDC40Q4G0X9 1142 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 TRAF7Q6Q0C0 670 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 CBWD2Q8IUF1 395 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 TMEM192Q8IY95 271 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 CAGE1Q8TC20 777 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 FAM212AQ96EL1 285 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 CNOT6LQ96LI5 555 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 NOC4LQ9BVI4 516 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 APOL6Q9BWW8 343 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 WNT8AQ9H1J5 351 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 CETN3O15182 167 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 TOM1L1O75674 476 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 NPTXRO95502 500 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 CAVIN2O95810 425 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 SELPP16109 830 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 BFSP2Q13515 415 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 TWF2Q6IBS0 349 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 IFNLR1Q8IU57 520 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 IRF2BP1Q8IU81 584 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 GRPEL1Q9HAV7 217 aa16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 AGO2Q9UKV8 859 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-202ENST00000318007 SCN5AQ14524 2016 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 KCNJ18B7U540 433 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 NBNO60934 754 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 NCBP1Q09161 790 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 KCNJ12Q14500 433 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 NOLC1Q14978 699 aaKnown RBP eCLIP16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 EDRF1Q3B7T1 1238 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 DCAF17Q5H9S7 520 aaPredicted RBP16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 TSHZ1Q6ZSZ6 1077 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 RPAINQ86UA6 219 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 TNS4Q8IZW8 715 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 CCDC155Q8N6L0 562 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 IFIH1Q9BYX4 1025 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 TRIM6Q9C030 488 aaPredicted RBP16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 CDT1Q9H211 546 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 AGPAT5Q9NUQ2 364 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 TAB2Q9NYJ8 693 aa16.81■□□□□ 0.28
PDLIM5-202ENST00000318007 TRIM43BA6NCK2 446 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 AP5Z1O43299 807 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 SYN1P17600 705 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 TPM4P67936 248 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 TCERG1LQ5VWI1 586 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 MPZL3Q6UWV2 235 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 ZPBP2Q6X784 338 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms