RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GIT1Q9Y2X7 761 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 KIAA1671Q9BY89 1806 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 A0A1B0GUA9 196 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.66■□□□□ 0.74
TPM1-203ENST00000317516 PRR33A8MZF0 331 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 CLASP2O75122 1294 aaKnown RBP19.66■□□□□ 0.74
TPM1-203ENST00000317516 DDHD2O94830 711 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 PTGDRQ13258 359 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 PPP2R5AQ15172 486 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 AMHR2Q16671 573 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 CES5AQ6NT32 575 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 SLC27A1Q6PCB7 646 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 PPFIBP1Q86W92 1011 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 TMEM173Q86WV6 379 aaPredicted RBP19.66■□□□□ 0.74
TPM1-203ENST00000317516 RNF135Q8IUD6 432 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 C4orf32Q8N8J7 132 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 SUSD6Q92537 303 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 S1PR5Q9H228 398 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 GPRC5CQ9NQ84 441 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 HCN4Q9Y3Q4 1203 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 HCFC2Q9Y5Z7 792 aa19.66■□□□□ 0.74
TPM1-203ENST00000317516 FAM86C2PA6NEL3 165 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 ARL5CA6NH57 179 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 NRP1O14786 923 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 INPPL1O15357 1258 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 AFF1P51825 1210 aaKnown RBP19.65■□□□□ 0.74
TPM1-203ENST00000317516 ITIH3Q06033 890 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 CBX2Q14781 532 aaPredicted RBP19.65■□□□□ 0.74
TPM1-203ENST00000317516 TMEM132AQ24JP5 1023 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 MCTP1Q6DN14 999 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 SYCE2Q6PIF2 218 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 TMX3Q96JJ7 454 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 IFT74Q96LB3 600 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 GAD1Q99259 594 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 EMILIN2Q9BXX0 1053 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 RNF39Q9H2S5 420 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 C11orf16Q9NQ32 467 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 SSX2IPQ9Y2D8 614 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 HES2Q9Y543 173 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 PLXNA4Q9HCM2 1894 aa19.65■□□□□ 0.74
TPM1-203ENST00000317516 LOC730098B7Z3J9 87 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 B4GALT5O43286 388 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 MLH1P40692 756 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 TOB1P50616 345 aaPredicted RBP19.64■□□□□ 0.73
TPM1-203ENST00000317516 NBR1Q14596 966 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 MAPK6Q16659 721 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 FAM187BQ17R55 369 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 RILPL1Q5EBL4 403 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 HERC4Q5GLZ8 1057 aaPredicted RBP19.64■□□□□ 0.73
TPM1-203ENST00000317516 KRT79Q5XKE5 535 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 DTHD1Q6ZMT9 781 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 DEPTORQ8TB45 409 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 APOL6Q9BWW8 343 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 FZD8Q9H461 694 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 MRPL17Q9NRX2 175 aaKnown RBP19.64■□□□□ 0.73
TPM1-203ENST00000317516 DZANK1Q9NVP4 752 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 KIAA1024Q9UPX6 916 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 PCDHB6Q9Y5E3 794 aa19.64■□□□□ 0.73
TPM1-203ENST00000317516 H3BQV1 296 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 NPTXRO95502 500 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 PRPHP41219 470 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 NAMPTP43490 491 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 OR1G1P47890 313 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 CDCA2Q69YH5 1023 aaPredicted RBP19.63■□□□□ 0.73
TPM1-203ENST00000317516 COLGALT2Q8IYK4 626 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 IGSF22Q8N9C0 903 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 BCL7CQ8WUZ0 217 aaPredicted RBP19.63■□□□□ 0.73
TPM1-203ENST00000317516 AUTS2Q8WXX7 1259 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 KIFAP3Q92845 792 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 NECTIN4Q96NY8 510 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 COLEC11Q9BWP8 271 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 APOL5Q9BWW9 433 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 BHMT2Q9H2M3 363 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 ADAM7Q9H2U9 754 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 PARP2Q9UGN5 583 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 MUTYHQ9UIF7 546 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 DNM3Q9UQ16 869 aa19.63■□□□□ 0.73
TPM1-203ENST00000317516 ARIH1Q9Y4X5 557 aaPredicted RBP19.63■□□□□ 0.73
TPM1-203ENST00000317516 N4BP3O15049 544 aa19.62■□□□□ 0.73
TPM1-203ENST00000317516 B4GALT3O60512 393 aa19.62■□□□□ 0.73
TPM1-203ENST00000317516 SCNN1GP51170 649 aa19.62■□□□□ 0.73
TPM1-203ENST00000317516 EFNA5P52803 228 aa19.62■□□□□ 0.73
TPM1-203ENST00000317516 PRPF4BQ13523 1007 aaKnown RBP19.62■□□□□ 0.73
TPM1-203ENST00000317516 RIPOR3Q96MK2 946 aa19.62■□□□□ 0.73
TPM1-203ENST00000317516 ZFP42Q96MM3 310 aa19.62■□□□□ 0.73
TPM1-203ENST00000317516 ADPGKQ9BRR6 497 aa19.62■□□□□ 0.73
TPM1-203ENST00000317516 NXF3Q9H4D5 531 aaKnown RBP19.62■□□□□ 0.73
TPM1-203ENST00000317516 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
TPM1-203ENST00000317516 PRG3Q9Y2Y8 225 aaPredicted RBP19.62■□□□□ 0.73
TPM1-203ENST00000317516 ATG2AQ2TAZ0 1938 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 ZMYM2Q9UBW7 1377 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 ACKR2O00590 384 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 SOD2P04179 222 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 AKAP5P24588 427 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 KLRC2P26717 231 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 GJB2P29033 226 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 MTHFRP42898 656 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms