RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 DDR1Q08345 913 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 RIPPLY1Q0D2K3 151 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 MIIPQ5JXC2 388 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 NUDCD3Q8IVD9 361 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 CPXCR1Q8N123 301 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 STKLD1Q8NE28 680 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 APPBP2Q92624 585 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 TM6SF1Q9BZW5 370 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 IQCA1LA6NCM1 817 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 MMP1P03956 469 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PARP1P09874 1014 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 CCDC159P0C7I6 412 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 KRT10P13645 584 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PLCG2P16885 1265 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 FUT2Q10981 343 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PPP2R5BQ15173 497 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 RTN1Q16799 776 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ADALQ6DHV7 355 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ZNF354CQ86Y25 554 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 C4orf32Q8N8J7 132 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 FAM81AQ8TBF8 368 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 NAT14Q8WUY8 206 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 SEC14L1Q92503 715 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PNMA5Q96PV4 448 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 MRPL46Q9H2W6 279 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 FAM169AQ9Y6X4 670 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 USP42Q9H9J4 1324 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 TTLL13PA6NNM8 815 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 KLRC4O43908 158 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 CETPP11597 493 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 CPEP16870 476 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 KLC1Q07866 573 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 BYSLQ13895 437 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 RAVER1Q8IY67 606 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 POMGNT1Q8WZA1 660 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 LPIN2Q92539 896 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 RABGGTAQ92696 567 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ALDH8A1Q9H2A2 487 aaPredicted RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 DBR1Q9UK59 544 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 MYMKA6NI61 221 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 AFPP02771 609 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 CSF1RP07333 972 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 CAPN1P07384 714 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 MSL3P1P0C860 447 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 GNAT1P11488 350 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PSMC1P62191 440 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 CCDC142Q17RM4 750 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 MUM1L1Q5H9M0 696 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PHLDB3Q6NSJ2 640 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ARHGEF2Q92974 986 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 ACTR5Q9H9F9 607 aaPredicted RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 BATF3Q9NR55 127 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 TUBA8Q9NY65 449 aaPredicted RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 TJP2Q9UDY2 1190 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 NFU1Q9UMS0 254 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 RREB1Q92766 1687 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 IRF6O14896 467 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 BAG3O95817 575 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 SERPINB2P05120 415 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 IDEP14735 1019 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 SLC39A14Q15043 492 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.87□□□□□ -1.79
GEN1-201ENST00000317402 LMBR1Q8WVP7 490 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 TRIM55Q9BYV6 548 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 TANGO6Q9C0B7 1094 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 SLC17A6Q9P2U8 582 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 A0A1B0GUL6 1792 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 ZSCAN5DPP0CG00 497 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 TM4SF1P30408 202 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PHEXP78562 749 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 MORC3Q14149 939 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 NR1I3Q14994 352 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 KIAA0753Q2KHM9 967 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ATP13A4Q4VNC1 1196 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 BEND6Q5SZJ8 279 aaPredicted RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 FAM133AQ8N9E0 248 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 CCHCR1Q8TD31 782 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 TNFRSF25Q93038 417 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PPANQ9NQ55 473 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 ZMYM6O95789 1325 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 SBF2Q86WG5 1849 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 GSTO1P78417 241 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 SEC23AQ15436 765 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 SNX31Q8N9S9 440 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ZNF483Q8TF39 744 aaPredicted RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 DHX38Q92620 1227 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 MCUR1Q96AQ8 359 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PI4K2AQ9BTU6 479 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 CCSER2Q9H7U1 834 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 IL1RAPL1Q9NZN1 696 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PRRC2CQ9Y520 2896 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 TNS3Q68CZ2 1445 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 P4HA2O15460 535 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 RNF40O75150 1001 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 SLC5A1P13866 664 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ERCC5P28715 1186 aaPredicted RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 TNNI2P48788 182 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ZBTB16Q05516 673 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 PDXDC2PQ6P474 469 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms