RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 LINGO3P0C6S8 592 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 USP17L8P0C7I0 530 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 GOLGA8HP0CJ92 632 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 TPBGLP0DKB5 382 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 NOVP48745 357 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 RAB27AP51159 221 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 TRIM68Q6AZZ1 485 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 MAML3Q96JK9 1138 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 FGD4Q96M96 766 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PSTPIP2Q9H939 334 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 VAT1LQ9HCJ6 419 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 ANGPTL2Q9UKU9 493 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PCDHA3Q9Y5H8 950 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 COL1A1P02452 1464 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 FRMPD4Q14CM0 1322 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 USP17L3A6NCW0 530 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 USP17L4A6NCW7 530 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 F8W8V4 182 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 EXOC3O60645 756 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 EDF1O60869 148 aaKnown RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PEX11AO75192 247 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SLC1A1P43005 524 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 EPM2AIP1Q7L775 607 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 USP17L1Q7RTZ2 530 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SLC9A9Q8IVB4 645 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 VPS52Q8N1B4 723 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 DRAXINQ8NBI3 349 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 LNX1Q8TBB1 728 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PARD3BQ8TEW8 1205 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 IWS1Q96ST2 819 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 ANAPC5Q9UJX4 755 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 RASA4BC9J798 803 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 RASA4O43374 803 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 ZBED4O75132 1171 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SKAP2O75563 359 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 CAMTA2O94983 1202 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 FAM13AO94988 1023 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PRDX5P30044 214 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PTK6Q13882 451 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SEPT7Q16181 437 aaKnown RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SGO2Q562F6 1265 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 C16orf86Q6ZW13 317 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SYT2Q8N9I0 419 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 NUDT12Q9BQG2 462 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SYT11Q9BT88 431 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SLC24A2Q9UI40 661 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 NR2E1Q9Y466 385 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 GPR75-ASB3A0A0A6YYF3 556 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PMM2O15305 246 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SLC37A4O43826 429 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 FGFR4P22455 802 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 CDR2Q01850 454 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 KYNUQ16719 465 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SNX30Q5VWJ9 437 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SRRM1Q8IYB3 904 aaKnown RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 RBM46Q8TBY0 533 aaKnown RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 CEP95Q96GE4 821 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 POLR3CQ9BUI4 534 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 NYXQ9GZU5 481 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 KANSL2Q9H9L4 492 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 OSGEPQ9NPF4 335 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 STX18Q9P2W9 335 aaKnown RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 DNAJB4Q9UDY4 337 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 MTMR7Q9Y216 660 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 C2CD2Q9Y426 696 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 ASB3Q9Y575 518 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 C4AP0C0L4 1744 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 C4BP0C0L5 1744 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 A8MXQ7 604 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SMIM22K7EJ46 135 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 IPO5O00410 1097 aaKnown RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 HAUS5O94927 633 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ADCY8P40145 1251 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SLC34A1Q06495 639 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 LRRC14Q15048 493 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 PDK4Q16654 411 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SPICE1Q8N0Z3 855 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 UHMK1Q8TAS1 419 aaKnown RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 MGARPQ8TDB4 240 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF384Q8TF68 577 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 HAS1Q92839 578 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SMC6Q96SB8 1091 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 UBA5Q9GZZ9 404 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 INTS2Q9H0H0 1204 aaKnown RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 TBC1D7Q9P0N9 293 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 COMMD3-BMI1R4GMX3 469 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ACSL3O95573 720 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ATP5BP06576 529 aaKnown RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 CDK8P49336 464 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF211Q13398 564 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 GIT2Q14161 759 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC62Q6P9F0 684 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 KIFAP3Q92845 792 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 DLGAP2Q9P1A6 1054 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 CYP3A7-CYP3A51PA0A087WV96 503 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ZBTB5O15062 677 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 MAP3K7O43318 606 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SNHG28P0DPA3 235 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 KRT15P19012 456 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms